Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2154 and HP15_2155 are separated by 11 nucleotides HP15_2155 and HP15_2156 are separated by 22 nucleotides HP15_2156 and HP15_2157 are separated by 223 nucleotides
HP15_2154: HP15_2154 - NADP-dependent glyceraldehyde-3-phosphate dehydrogenase, at 2,259,347 to 2,260,978
_2154
HP15_2155: HP15_2155 - triosephosphate isomerase, at 2,260,990 to 2,261,796
_2155
HP15_2156: HP15_2156 - phosphopyruvate hydratase, at 2,261,819 to 2,263,060
_2156
HP15_2157: HP15_2157 - methyl-accepting chemotaxis protein, at 2,263,284 to 2,265,290
_2157
Position (kb)
2261
2262
2263
2264 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2260.851 kb on - strand at 2260.861 kb on - strand at 2260.895 kb on + strand at 2261.111 kb on + strand, within HP15_2155 at 2261.113 kb on + strand, within HP15_2155 at 2261.121 kb on + strand, within HP15_2155 at 2261.147 kb on - strand, within HP15_2155 at 2261.147 kb on - strand, within HP15_2155 at 2261.403 kb on - strand, within HP15_2155 at 2261.435 kb on - strand, within HP15_2155 at 2261.473 kb on - strand, within HP15_2155 at 2261.520 kb on - strand, within HP15_2155 at 2261.591 kb on - strand, within HP15_2155 at 2261.663 kb on - strand, within HP15_2155 at 2261.909 kb on - strand at 2261.920 kb on + strand at 2262.061 kb on + strand, within HP15_2156 at 2262.069 kb on - strand, within HP15_2156 at 2262.096 kb on + strand, within HP15_2156 at 2262.251 kb on - strand, within HP15_2156 at 2262.539 kb on + strand, within HP15_2156 at 2262.564 kb on + strand, within HP15_2156 at 2262.582 kb on + strand, within HP15_2156 at 2262.715 kb on + strand, within HP15_2156 at 2262.941 kb on - strand at 2263.121 kb on + strand at 2263.458 kb on - strand at 2263.477 kb on - strand at 2263.510 kb on - strand, within HP15_2157 at 2263.552 kb on + strand, within HP15_2157 at 2263.820 kb on - strand, within HP15_2157 at 2263.822 kb on + strand, within HP15_2157 at 2263.842 kb on + strand, within HP15_2157 at 2263.855 kb on - strand, within HP15_2157 at 2263.908 kb on + strand, within HP15_2157 at 2263.921 kb on + strand, within HP15_2157
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 2,260,851 - -0.2 2,260,861 - -0.7 2,260,895 + +3.4 2,261,111 + HP15_2155 0.15 -1.1 2,261,113 + HP15_2155 0.15 -1.8 2,261,121 + HP15_2155 0.16 +0.7 2,261,147 - HP15_2155 0.19 -0.3 2,261,147 - HP15_2155 0.19 -0.2 2,261,403 - HP15_2155 0.51 +0.7 2,261,435 - HP15_2155 0.55 -0.6 2,261,473 - HP15_2155 0.60 -1.9 2,261,520 - HP15_2155 0.66 -1.9 2,261,591 - HP15_2155 0.74 +0.7 2,261,663 - HP15_2155 0.83 -0.3 2,261,909 - -0.2 2,261,920 + -0.3 2,262,061 + HP15_2156 0.19 +0.2 2,262,069 - HP15_2156 0.20 -0.1 2,262,096 + HP15_2156 0.22 -0.7 2,262,251 - HP15_2156 0.35 +0.9 2,262,539 + HP15_2156 0.58 -1.7 2,262,564 + HP15_2156 0.60 +1.2 2,262,582 + HP15_2156 0.61 +0.5 2,262,715 + HP15_2156 0.72 +0.1 2,262,941 - -0.4 2,263,121 + -1.0 2,263,458 - +0.6 2,263,477 - -1.2 2,263,510 - HP15_2157 0.11 -0.5 2,263,552 + HP15_2157 0.13 +1.0 2,263,820 - HP15_2157 0.27 -0.2 2,263,822 + HP15_2157 0.27 +0.3 2,263,842 + HP15_2157 0.28 -0.6 2,263,855 - HP15_2157 0.28 -0.1 2,263,908 + HP15_2157 0.31 -0.5 2,263,921 + HP15_2157 0.32 -0.6
Or see this region's nucleotide sequence