Experiment: m.b. Zinc 0.1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PGA1_c21280 and PGA1_c21290 are separated by 90 nucleotides PGA1_c21290 and PGA1_c21300 are separated by 20 nucleotides PGA1_c21300 and PGA1_c21310 are separated by 175 nucleotides
PGA1_c21280: PGA1_c21280 - transcriptional regulator, LysR family, at 2,201,537 to 2,202,451
_c21280
PGA1_c21290: PGA1_c21290 - alpha-ketoglutarate-dependent taurine dioxygenase TauD, at 2,202,542 to 2,203,378
_c21290
PGA1_c21300: PGA1_c21300 - arylsulfatase AtsA, at 2,203,399 to 2,205,030
_c21300
PGA1_c21310: PGA1_c21310 - multidrug resistance protein NorM, at 2,205,206 to 2,206,600
_c21310
Position (kb)
2203
2204
2205
2206 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 2202.417 kb on + strand at 2202.419 kb on + strand at 2202.425 kb on - strand at 2202.430 kb on + strand at 2202.430 kb on + strand at 2202.430 kb on + strand at 2202.436 kb on + strand at 2202.436 kb on + strand at 2202.438 kb on - strand at 2202.444 kb on - strand at 2202.444 kb on - strand at 2202.473 kb on - strand at 2202.505 kb on + strand at 2202.505 kb on + strand at 2202.505 kb on + strand at 2202.505 kb on + strand at 2202.505 kb on + strand at 2202.505 kb on + strand at 2202.505 kb on + strand at 2202.506 kb on + strand at 2202.506 kb on + strand at 2202.506 kb on + strand at 2202.506 kb on + strand at 2202.506 kb on + strand at 2202.506 kb on + strand at 2202.506 kb on + strand at 2202.506 kb on + strand at 2202.506 kb on + strand at 2202.506 kb on + strand at 2202.506 kb on + strand at 2202.506 kb on + strand at 2202.506 kb on + strand at 2202.506 kb on + strand at 2202.506 kb on + strand at 2202.506 kb on + strand at 2202.506 kb on + strand at 2202.506 kb on + strand at 2202.506 kb on + strand at 2202.506 kb on + strand at 2202.506 kb on + strand at 2202.506 kb on + strand at 2202.506 kb on + strand at 2202.506 kb on + strand at 2202.506 kb on + strand at 2202.506 kb on + strand at 2202.506 kb on + strand at 2202.506 kb on + strand at 2202.506 kb on + strand at 2202.506 kb on + strand at 2202.513 kb on - strand at 2202.513 kb on - strand at 2202.513 kb on - strand at 2202.514 kb on - strand at 2202.514 kb on - strand at 2202.514 kb on - strand at 2202.514 kb on - strand at 2202.514 kb on - strand at 2202.514 kb on - strand at 2202.514 kb on - strand at 2202.514 kb on - strand at 2202.514 kb on - strand at 2202.514 kb on - strand at 2202.514 kb on - strand at 2202.514 kb on - strand at 2202.514 kb on - strand at 2202.514 kb on - strand at 2202.514 kb on - strand at 2202.514 kb on - strand at 2202.514 kb on - strand at 2202.514 kb on - strand at 2202.514 kb on - strand at 2202.514 kb on - strand at 2202.514 kb on - strand at 2202.514 kb on - strand at 2202.514 kb on - strand at 2202.514 kb on - strand at 2202.514 kb on - strand at 2202.514 kb on - strand at 2202.514 kb on - strand at 2202.514 kb on - strand at 2202.514 kb on - strand at 2202.514 kb on - strand at 2202.514 kb on - strand at 2202.514 kb on - strand at 2202.514 kb on - strand at 2202.514 kb on - strand at 2202.514 kb on - strand at 2202.514 kb on - strand at 2202.514 kb on - strand at 2202.514 kb on - strand at 2202.514 kb on - strand at 2202.514 kb on - strand at 2202.514 kb on - strand at 2202.514 kb on - strand at 2202.514 kb on - strand at 2202.514 kb on - strand at 2202.514 kb on - strand at 2202.514 kb on - strand at 2202.514 kb on - strand at 2202.514 kb on - strand at 2202.514 kb on - strand at 2202.514 kb on - strand at 2202.514 kb on - strand at 2202.524 kb on - strand at 2202.524 kb on - strand at 2202.528 kb on + strand at 2202.528 kb on - strand at 2202.567 kb on + strand at 2202.633 kb on + strand, within PGA1_c21290 at 2202.641 kb on - strand, within PGA1_c21290 at 2202.656 kb on + strand, within PGA1_c21290 at 2202.673 kb on - strand, within PGA1_c21290 at 2202.680 kb on - strand, within PGA1_c21290 at 2202.689 kb on + strand, within PGA1_c21290 at 2202.697 kb on - strand, within PGA1_c21290 at 2202.801 kb on - strand, within PGA1_c21290 at 2202.814 kb on - strand, within PGA1_c21290 at 2202.863 kb on - strand, within PGA1_c21290 at 2202.974 kb on + strand, within PGA1_c21290 at 2202.974 kb on + strand, within PGA1_c21290 at 2202.982 kb on - strand, within PGA1_c21290 at 2203.050 kb on + strand, within PGA1_c21290 at 2203.065 kb on + strand, within PGA1_c21290 at 2203.073 kb on - strand, within PGA1_c21290 at 2203.082 kb on - strand, within PGA1_c21290 at 2203.097 kb on + strand, within PGA1_c21290 at 2203.100 kb on - strand, within PGA1_c21290 at 2203.144 kb on - strand, within PGA1_c21290 at 2203.184 kb on + strand, within PGA1_c21290 at 2203.203 kb on - strand, within PGA1_c21290 at 2203.222 kb on + strand, within PGA1_c21290 at 2203.262 kb on - strand, within PGA1_c21290 at 2203.288 kb on - strand, within PGA1_c21290 at 2203.288 kb on - strand, within PGA1_c21290 at 2203.293 kb on - strand, within PGA1_c21290 at 2203.340 kb on + strand at 2203.346 kb on - strand at 2203.346 kb on - strand at 2203.363 kb on + strand at 2203.375 kb on - strand at 2203.381 kb on - strand at 2203.381 kb on - strand at 2203.404 kb on - strand at 2203.407 kb on + strand at 2203.434 kb on + strand at 2203.441 kb on - strand at 2203.444 kb on + strand at 2203.477 kb on + strand at 2203.485 kb on - strand at 2203.487 kb on + strand at 2203.523 kb on + strand at 2203.531 kb on - strand at 2203.538 kb on + strand at 2203.555 kb on + strand at 2203.565 kb on - strand, within PGA1_c21300 at 2203.565 kb on - strand, within PGA1_c21300 at 2203.602 kb on - strand, within PGA1_c21300 at 2203.663 kb on + strand, within PGA1_c21300 at 2203.794 kb on + strand, within PGA1_c21300 at 2203.802 kb on - strand, within PGA1_c21300 at 2203.825 kb on - strand, within PGA1_c21300 at 2203.852 kb on + strand, within PGA1_c21300 at 2203.852 kb on + strand, within PGA1_c21300 at 2203.852 kb on + strand at 2203.852 kb on + strand, within PGA1_c21300 at 2203.860 kb on - strand, within PGA1_c21300 at 2203.870 kb on - strand, within PGA1_c21300 at 2203.900 kb on + strand, within PGA1_c21300 at 2203.905 kb on - strand, within PGA1_c21300 at 2203.908 kb on - strand, within PGA1_c21300 at 2203.911 kb on + strand, within PGA1_c21300 at 2203.919 kb on - strand, within PGA1_c21300 at 2204.036 kb on + strand, within PGA1_c21300 at 2204.042 kb on - strand, within PGA1_c21300 at 2204.042 kb on - strand, within PGA1_c21300 at 2204.054 kb on + strand, within PGA1_c21300 at 2204.094 kb on + strand, within PGA1_c21300 at 2204.137 kb on + strand, within PGA1_c21300 at 2204.138 kb on + strand, within PGA1_c21300 at 2204.144 kb on + strand, within PGA1_c21300 at 2204.146 kb on - strand, within PGA1_c21300 at 2204.146 kb on - strand, within PGA1_c21300 at 2204.146 kb on - strand, within PGA1_c21300 at 2204.152 kb on - strand, within PGA1_c21300 at 2204.167 kb on - strand, within PGA1_c21300 at 2204.167 kb on - strand, within PGA1_c21300 at 2204.181 kb on - strand, within PGA1_c21300 at 2204.195 kb on + strand, within PGA1_c21300 at 2204.203 kb on - strand, within PGA1_c21300 at 2204.203 kb on - strand, within PGA1_c21300 at 2204.203 kb on - strand, within PGA1_c21300 at 2204.203 kb on - strand, within PGA1_c21300 at 2204.217 kb on + strand, within PGA1_c21300 at 2204.272 kb on - strand, within PGA1_c21300 at 2204.272 kb on - strand, within PGA1_c21300 at 2204.375 kb on - strand, within PGA1_c21300 at 2204.375 kb on - strand, within PGA1_c21300 at 2204.439 kb on - strand, within PGA1_c21300 at 2204.467 kb on + strand, within PGA1_c21300 at 2204.493 kb on + strand, within PGA1_c21300 at 2204.498 kb on + strand, within PGA1_c21300 at 2204.535 kb on + strand, within PGA1_c21300 at 2204.591 kb on + strand, within PGA1_c21300 at 2204.599 kb on - strand, within PGA1_c21300 at 2204.599 kb on - strand, within PGA1_c21300 at 2204.660 kb on - strand, within PGA1_c21300 at 2204.700 kb on + strand, within PGA1_c21300 at 2204.700 kb on + strand, within PGA1_c21300 at 2204.782 kb on - strand, within PGA1_c21300 at 2204.814 kb on + strand, within PGA1_c21300 at 2204.814 kb on + strand, within PGA1_c21300 at 2204.814 kb on + strand, within PGA1_c21300 at 2204.814 kb on + strand, within PGA1_c21300 at 2204.814 kb on + strand, within PGA1_c21300 at 2204.822 kb on - strand, within PGA1_c21300 at 2204.822 kb on - strand, within PGA1_c21300 at 2204.827 kb on - strand, within PGA1_c21300 at 2204.873 kb on + strand at 2204.873 kb on + strand at 2204.881 kb on - strand at 2204.906 kb on - strand at 2204.934 kb on + strand at 2205.011 kb on - strand at 2205.017 kb on + strand at 2205.075 kb on + strand at 2205.078 kb on - strand at 2205.155 kb on + strand at 2205.184 kb on - strand at 2205.249 kb on - strand at 2205.315 kb on - strand at 2205.387 kb on - strand, within PGA1_c21310 at 2205.414 kb on + strand, within PGA1_c21310 at 2205.419 kb on + strand, within PGA1_c21310 at 2205.427 kb on - strand, within PGA1_c21310 at 2205.427 kb on - strand, within PGA1_c21310 at 2205.434 kb on + strand, within PGA1_c21310 at 2205.437 kb on - strand, within PGA1_c21310 at 2205.454 kb on + strand, within PGA1_c21310 at 2205.462 kb on + strand, within PGA1_c21310 at 2205.678 kb on - strand, within PGA1_c21310 at 2205.710 kb on - strand, within PGA1_c21310 at 2205.720 kb on - strand, within PGA1_c21310 at 2205.751 kb on + strand, within PGA1_c21310 at 2205.847 kb on - strand, within PGA1_c21310 at 2205.921 kb on + strand, within PGA1_c21310
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Zinc 0.1 mM remove 2,202,417 + -0.7 2,202,419 + -0.2 2,202,425 - -0.7 2,202,430 + +0.3 2,202,430 + +0.6 2,202,430 + +0.8 2,202,436 + +0.7 2,202,436 + +0.1 2,202,438 - -2.4 2,202,444 - +0.4 2,202,444 - -0.8 2,202,473 - +0.3 2,202,505 + +1.7 2,202,505 + +0.4 2,202,505 + +0.6 2,202,505 + -0.1 2,202,505 + -1.2 2,202,505 + -0.3 2,202,505 + -0.3 2,202,506 + -0.7 2,202,506 + +0.6 2,202,506 + +0.3 2,202,506 + +1.3 2,202,506 + +0.4 2,202,506 + -0.4 2,202,506 + +0.2 2,202,506 + -0.7 2,202,506 + -0.8 2,202,506 + -2.9 2,202,506 + +0.8 2,202,506 + -0.4 2,202,506 + -0.1 2,202,506 + -0.8 2,202,506 + +1.2 2,202,506 + -0.6 2,202,506 + -0.1 2,202,506 + -1.7 2,202,506 + -0.0 2,202,506 + -1.0 2,202,506 + -2.4 2,202,506 + +1.2 2,202,506 + +0.7 2,202,506 + -0.9 2,202,506 + -0.1 2,202,506 + -2.8 2,202,506 + +0.6 2,202,506 + -1.4 2,202,506 + +1.7 2,202,506 + +0.8 2,202,513 - -1.1 2,202,513 - -0.1 2,202,513 - -1.0 2,202,514 - +0.4 2,202,514 - +0.2 2,202,514 - +0.0 2,202,514 - -0.2 2,202,514 - +0.1 2,202,514 - +0.2 2,202,514 - -1.4 2,202,514 - -1.1 2,202,514 - +1.0 2,202,514 - +0.8 2,202,514 - +0.0 2,202,514 - +0.7 2,202,514 - +0.6 2,202,514 - -2.6 2,202,514 - -0.6 2,202,514 - -0.2 2,202,514 - -0.8 2,202,514 - -0.4 2,202,514 - -0.3 2,202,514 - +0.6 2,202,514 - -0.1 2,202,514 - -0.3 2,202,514 - +0.6 2,202,514 - -0.1 2,202,514 - -0.1 2,202,514 - +1.1 2,202,514 - +0.8 2,202,514 - +1.9 2,202,514 - -0.0 2,202,514 - +0.1 2,202,514 - +0.6 2,202,514 - +0.0 2,202,514 - -0.5 2,202,514 - -2.1 2,202,514 - +4.0 2,202,514 - -2.2 2,202,514 - +0.9 2,202,514 - -0.9 2,202,514 - -0.2 2,202,514 - -0.2 2,202,514 - -0.0 2,202,514 - +0.3 2,202,514 - +0.3 2,202,514 - -0.7 2,202,514 - +0.9 2,202,514 - -0.9 2,202,514 - -1.4 2,202,514 - +0.6 2,202,514 - -0.2 2,202,514 - +1.6 2,202,514 - -0.5 2,202,524 - +0.5 2,202,524 - +0.3 2,202,528 + -0.7 2,202,528 - +0.2 2,202,567 + -2.0 2,202,633 + PGA1_c21290 0.11 +0.3 2,202,641 - PGA1_c21290 0.12 +0.9 2,202,656 + PGA1_c21290 0.14 +1.4 2,202,673 - PGA1_c21290 0.16 -0.8 2,202,680 - PGA1_c21290 0.16 -0.8 2,202,689 + PGA1_c21290 0.18 -1.7 2,202,697 - PGA1_c21290 0.19 -0.3 2,202,801 - PGA1_c21290 0.31 -1.3 2,202,814 - PGA1_c21290 0.32 -0.1 2,202,863 - PGA1_c21290 0.38 +0.2 2,202,974 + PGA1_c21290 0.52 -0.7 2,202,974 + PGA1_c21290 0.52 -0.6 2,202,982 - PGA1_c21290 0.53 -0.1 2,203,050 + PGA1_c21290 0.61 -0.4 2,203,065 + PGA1_c21290 0.62 -0.4 2,203,073 - PGA1_c21290 0.63 -1.5 2,203,082 - PGA1_c21290 0.65 +1.6 2,203,097 + PGA1_c21290 0.66 -0.4 2,203,100 - PGA1_c21290 0.67 -0.1 2,203,144 - PGA1_c21290 0.72 +1.2 2,203,184 + PGA1_c21290 0.77 -0.0 2,203,203 - PGA1_c21290 0.79 -2.0 2,203,222 + PGA1_c21290 0.81 -0.6 2,203,262 - PGA1_c21290 0.86 -1.0 2,203,288 - PGA1_c21290 0.89 +0.9 2,203,288 - PGA1_c21290 0.89 -0.0 2,203,293 - PGA1_c21290 0.90 +0.8 2,203,340 + +0.2 2,203,346 - -1.0 2,203,346 - -0.4 2,203,363 + -0.1 2,203,375 - -1.6 2,203,381 - +0.5 2,203,381 - -1.3 2,203,404 - -1.0 2,203,407 + -0.1 2,203,434 + +0.6 2,203,441 - -3.3 2,203,444 + +1.4 2,203,477 + -0.6 2,203,485 - -0.4 2,203,487 + -0.8 2,203,523 + -0.5 2,203,531 - +0.8 2,203,538 + +0.9 2,203,555 + +0.2 2,203,565 - PGA1_c21300 0.10 -0.3 2,203,565 - PGA1_c21300 0.10 +0.1 2,203,602 - PGA1_c21300 0.12 +1.4 2,203,663 + PGA1_c21300 0.16 +0.8 2,203,794 + PGA1_c21300 0.24 +0.8 2,203,802 - PGA1_c21300 0.25 +0.3 2,203,825 - PGA1_c21300 0.26 +1.6 2,203,852 + PGA1_c21300 0.28 +1.1 2,203,852 + PGA1_c21300 0.28 -0.8 2,203,852 + +0.6 2,203,852 + PGA1_c21300 0.28 +0.9 2,203,860 - PGA1_c21300 0.28 +0.8 2,203,870 - PGA1_c21300 0.29 +0.4 2,203,900 + PGA1_c21300 0.31 +0.5 2,203,905 - PGA1_c21300 0.31 +0.5 2,203,908 - PGA1_c21300 0.31 +1.5 2,203,911 + PGA1_c21300 0.31 -0.5 2,203,919 - PGA1_c21300 0.32 +0.6 2,204,036 + PGA1_c21300 0.39 -0.4 2,204,042 - PGA1_c21300 0.39 +1.2 2,204,042 - PGA1_c21300 0.39 +0.6 2,204,054 + PGA1_c21300 0.40 +0.3 2,204,094 + PGA1_c21300 0.43 -0.0 2,204,137 + PGA1_c21300 0.45 +0.8 2,204,138 + PGA1_c21300 0.45 +0.4 2,204,144 + PGA1_c21300 0.46 -0.6 2,204,146 - PGA1_c21300 0.46 +0.3 2,204,146 - PGA1_c21300 0.46 +0.5 2,204,146 - PGA1_c21300 0.46 +0.4 2,204,152 - PGA1_c21300 0.46 +0.7 2,204,167 - PGA1_c21300 0.47 +0.2 2,204,167 - PGA1_c21300 0.47 +1.0 2,204,181 - PGA1_c21300 0.48 +0.8 2,204,195 + PGA1_c21300 0.49 +2.2 2,204,203 - PGA1_c21300 0.49 -0.2 2,204,203 - PGA1_c21300 0.49 +0.2 2,204,203 - PGA1_c21300 0.49 -0.4 2,204,203 - PGA1_c21300 0.49 -0.4 2,204,217 + PGA1_c21300 0.50 -0.4 2,204,272 - PGA1_c21300 0.53 +0.3 2,204,272 - PGA1_c21300 0.53 +0.4 2,204,375 - PGA1_c21300 0.60 +0.3 2,204,375 - PGA1_c21300 0.60 +0.5 2,204,439 - PGA1_c21300 0.64 +2.0 2,204,467 + PGA1_c21300 0.65 -0.8 2,204,493 + PGA1_c21300 0.67 -0.8 2,204,498 + PGA1_c21300 0.67 +0.1 2,204,535 + PGA1_c21300 0.70 -2.4 2,204,591 + PGA1_c21300 0.73 -0.3 2,204,599 - PGA1_c21300 0.74 +0.9 2,204,599 - PGA1_c21300 0.74 -0.9 2,204,660 - PGA1_c21300 0.77 +0.2 2,204,700 + PGA1_c21300 0.80 +0.6 2,204,700 + PGA1_c21300 0.80 -0.3 2,204,782 - PGA1_c21300 0.85 -0.6 2,204,814 + PGA1_c21300 0.87 -2.0 2,204,814 + PGA1_c21300 0.87 +1.3 2,204,814 + PGA1_c21300 0.87 -0.2 2,204,814 + PGA1_c21300 0.87 -0.0 2,204,814 + PGA1_c21300 0.87 +0.1 2,204,822 - PGA1_c21300 0.87 +0.6 2,204,822 - PGA1_c21300 0.87 -1.4 2,204,827 - PGA1_c21300 0.88 +0.7 2,204,873 + -0.4 2,204,873 + -1.2 2,204,881 - +0.2 2,204,906 - +0.6 2,204,934 + -2.1 2,205,011 - -1.8 2,205,017 + +0.7 2,205,075 + -0.4 2,205,078 - +0.3 2,205,155 + -0.2 2,205,184 - -0.0 2,205,249 - +1.8 2,205,315 - -1.0 2,205,387 - PGA1_c21310 0.13 -0.3 2,205,414 + PGA1_c21310 0.15 -0.1 2,205,419 + PGA1_c21310 0.15 -2.0 2,205,427 - PGA1_c21310 0.16 -0.5 2,205,427 - PGA1_c21310 0.16 +0.6 2,205,434 + PGA1_c21310 0.16 -0.2 2,205,437 - PGA1_c21310 0.17 +0.1 2,205,454 + PGA1_c21310 0.18 -0.0 2,205,462 + PGA1_c21310 0.18 +0.4 2,205,678 - PGA1_c21310 0.34 +0.7 2,205,710 - PGA1_c21310 0.36 -0.4 2,205,720 - PGA1_c21310 0.37 +0.2 2,205,751 + PGA1_c21310 0.39 +1.4 2,205,847 - PGA1_c21310 0.46 -0.8 2,205,921 + PGA1_c21310 0.51 +0.6
Or see this region's nucleotide sequence