Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_148 and HP15_149 are separated by 35 nucleotides HP15_149 and HP15_150 are separated by 27 nucleotides HP15_150 and HP15_151 are separated by 46 nucleotides
HP15_148: HP15_148 - secreted protein, at 150,161 to 150,655
_148
HP15_149: HP15_149 - conserved hypothetical protein, at 150,691 to 151,485
_149
HP15_150: HP15_150 - hypothetical protein, at 151,513 to 151,749
_150
HP15_151: HP15_151 - conserved hypothetical protein, membrane, at 151,796 to 152,884
_151
Position (kb)
151
152 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 150.524 kb on - strand, within HP15_148 at 150.539 kb on + strand, within HP15_148 at 150.552 kb on - strand, within HP15_148 at 150.579 kb on + strand, within HP15_148 at 150.594 kb on + strand, within HP15_148 at 150.594 kb on + strand, within HP15_148 at 150.602 kb on - strand, within HP15_148 at 150.602 kb on - strand, within HP15_148 at 150.706 kb on + strand at 150.706 kb on + strand at 150.706 kb on + strand at 150.706 kb on + strand at 150.706 kb on + strand at 150.714 kb on - strand at 150.751 kb on - strand at 150.758 kb on - strand at 150.848 kb on - strand, within HP15_149 at 150.849 kb on - strand, within HP15_149 at 150.915 kb on + strand, within HP15_149 at 150.943 kb on + strand, within HP15_149 at 150.953 kb on - strand, within HP15_149 at 150.953 kb on - strand, within HP15_149 at 151.014 kb on + strand, within HP15_149 at 151.014 kb on + strand, within HP15_149 at 151.014 kb on + strand, within HP15_149 at 151.022 kb on - strand, within HP15_149 at 151.024 kb on + strand, within HP15_149 at 151.024 kb on + strand, within HP15_149 at 151.024 kb on + strand, within HP15_149 at 151.032 kb on - strand, within HP15_149 at 151.032 kb on - strand, within HP15_149 at 151.032 kb on - strand, within HP15_149 at 151.032 kb on - strand, within HP15_149 at 151.067 kb on - strand, within HP15_149 at 151.148 kb on + strand, within HP15_149 at 151.196 kb on + strand, within HP15_149 at 151.276 kb on + strand, within HP15_149 at 151.276 kb on + strand, within HP15_149 at 151.284 kb on - strand, within HP15_149 at 151.286 kb on + strand, within HP15_149 at 151.286 kb on + strand, within HP15_149 at 151.341 kb on + strand, within HP15_149 at 151.347 kb on + strand, within HP15_149 at 151.372 kb on + strand, within HP15_149 at 151.380 kb on - strand, within HP15_149 at 151.380 kb on - strand, within HP15_149 at 151.411 kb on + strand at 151.421 kb on + strand at 151.429 kb on - strand at 151.429 kb on - strand at 151.447 kb on + strand at 151.474 kb on + strand at 151.645 kb on + strand, within HP15_150 at 151.673 kb on - strand, within HP15_150 at 151.677 kb on + strand, within HP15_150 at 151.766 kb on + strand at 151.801 kb on - strand at 151.838 kb on - strand at 151.905 kb on - strand, within HP15_151 at 151.912 kb on + strand, within HP15_151 at 151.920 kb on - strand, within HP15_151 at 152.032 kb on + strand, within HP15_151 at 152.104 kb on - strand, within HP15_151 at 152.221 kb on + strand, within HP15_151 at 152.225 kb on + strand, within HP15_151 at 152.251 kb on + strand, within HP15_151 at 152.259 kb on - strand, within HP15_151 at 152.281 kb on - strand, within HP15_151 at 152.311 kb on + strand, within HP15_151 at 152.311 kb on + strand, within HP15_151 at 152.319 kb on - strand, within HP15_151 at 152.319 kb on - strand, within HP15_151 at 152.319 kb on - strand, within HP15_151 at 152.437 kb on + strand, within HP15_151 at 152.452 kb on + strand, within HP15_151 at 152.452 kb on + strand, within HP15_151 at 152.570 kb on + strand, within HP15_151 at 152.707 kb on + strand, within HP15_151 at 152.724 kb on + strand, within HP15_151
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 150,524 - HP15_148 0.73 +0.7 150,539 + HP15_148 0.76 -0.6 150,552 - HP15_148 0.79 +0.3 150,579 + HP15_148 0.84 +0.7 150,594 + HP15_148 0.87 -0.2 150,594 + HP15_148 0.87 +0.1 150,602 - HP15_148 0.89 -0.2 150,602 - HP15_148 0.89 -0.5 150,706 + -0.6 150,706 + -0.5 150,706 + -1.0 150,706 + -0.0 150,706 + +2.4 150,714 - +0.3 150,751 - +0.1 150,758 - -0.1 150,848 - HP15_149 0.20 -1.2 150,849 - HP15_149 0.20 +0.2 150,915 + HP15_149 0.28 +1.2 150,943 + HP15_149 0.32 +0.0 150,953 - HP15_149 0.33 +0.3 150,953 - HP15_149 0.33 +2.0 151,014 + HP15_149 0.41 +1.3 151,014 + HP15_149 0.41 +1.2 151,014 + HP15_149 0.41 -2.2 151,022 - HP15_149 0.42 +1.4 151,024 + HP15_149 0.42 +0.7 151,024 + HP15_149 0.42 -1.0 151,024 + HP15_149 0.42 -0.3 151,032 - HP15_149 0.43 +0.1 151,032 - HP15_149 0.43 +0.3 151,032 - HP15_149 0.43 +0.7 151,032 - HP15_149 0.43 +0.7 151,067 - HP15_149 0.47 -1.2 151,148 + HP15_149 0.57 -0.3 151,196 + HP15_149 0.64 +1.5 151,276 + HP15_149 0.74 +0.8 151,276 + HP15_149 0.74 -0.4 151,284 - HP15_149 0.75 -0.3 151,286 + HP15_149 0.75 -2.0 151,286 + HP15_149 0.75 +1.3 151,341 + HP15_149 0.82 -0.1 151,347 + HP15_149 0.83 +0.8 151,372 + HP15_149 0.86 +0.2 151,380 - HP15_149 0.87 -0.2 151,380 - HP15_149 0.87 -0.4 151,411 + -0.7 151,421 + +1.0 151,429 - +0.8 151,429 - -1.0 151,447 + -1.2 151,474 + -0.2 151,645 + HP15_150 0.56 -0.5 151,673 - HP15_150 0.68 -4.2 151,677 + HP15_150 0.69 -0.8 151,766 + -0.7 151,801 - -0.6 151,838 - +0.8 151,905 - HP15_151 0.10 -0.8 151,912 + HP15_151 0.11 -0.3 151,920 - HP15_151 0.11 -0.7 152,032 + HP15_151 0.22 -0.4 152,104 - HP15_151 0.28 +0.7 152,221 + HP15_151 0.39 -0.8 152,225 + HP15_151 0.39 -1.0 152,251 + HP15_151 0.42 +0.5 152,259 - HP15_151 0.43 -0.6 152,281 - HP15_151 0.45 -0.9 152,311 + HP15_151 0.47 +0.2 152,311 + HP15_151 0.47 +0.7 152,319 - HP15_151 0.48 -0.2 152,319 - HP15_151 0.48 -0.0 152,319 - HP15_151 0.48 -0.1 152,437 + HP15_151 0.59 +0.2 152,452 + HP15_151 0.60 +0.5 152,452 + HP15_151 0.60 +0.8 152,570 + HP15_151 0.71 +0.5 152,707 + HP15_151 0.84 -0.1 152,724 + HP15_151 0.85 -0.2
Or see this region's nucleotide sequence