Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_1332 and HP15_1333 are separated by 49 nucleotides HP15_1333 and HP15_1334 overlap by 1 nucleotides
HP15_1332: HP15_1332 - sodium ion-translocating decarboxylase, beta subunit, at 1,397,804 to 1,399,126
_1332
HP15_1333: HP15_1333 - error-prone DNA polymerase, at 1,399,176 to 1,402,295
_1333
HP15_1334: HP15_1334 - Error-prone polymerase for DNA repair (imuB or polY like) (from data) , at 1,402,295 to 1,403,713
_1334
Position (kb)
1399
1400
1401
1402
1403 Strain fitness (log2 ratio)
-6
-5
-4
-3
-2
-1
0
1 at 1398.192 kb on - strand, within HP15_1332 at 1398.213 kb on - strand, within HP15_1332 at 1398.365 kb on + strand, within HP15_1332 at 1398.365 kb on + strand, within HP15_1332 at 1398.575 kb on - strand, within HP15_1332 at 1398.659 kb on + strand, within HP15_1332 at 1398.712 kb on + strand, within HP15_1332 at 1398.720 kb on - strand, within HP15_1332 at 1398.763 kb on - strand, within HP15_1332 at 1398.772 kb on - strand, within HP15_1332 at 1398.951 kb on - strand, within HP15_1332 at 1399.339 kb on - strand at 1399.410 kb on + strand at 1399.549 kb on + strand, within HP15_1333 at 1399.562 kb on - strand, within HP15_1333 at 1399.610 kb on + strand, within HP15_1333 at 1399.641 kb on + strand, within HP15_1333 at 1399.658 kb on + strand, within HP15_1333 at 1399.678 kb on - strand, within HP15_1333 at 1399.704 kb on - strand, within HP15_1333 at 1399.771 kb on - strand, within HP15_1333 at 1399.829 kb on - strand, within HP15_1333 at 1400.001 kb on - strand, within HP15_1333 at 1400.029 kb on + strand, within HP15_1333 at 1400.031 kb on + strand, within HP15_1333 at 1400.037 kb on - strand, within HP15_1333 at 1400.349 kb on + strand, within HP15_1333 at 1400.357 kb on - strand, within HP15_1333 at 1400.357 kb on - strand, within HP15_1333 at 1400.398 kb on - strand, within HP15_1333 at 1400.398 kb on - strand, within HP15_1333 at 1400.427 kb on - strand, within HP15_1333 at 1400.672 kb on - strand, within HP15_1333 at 1400.685 kb on - strand, within HP15_1333 at 1400.695 kb on + strand, within HP15_1333 at 1400.705 kb on + strand, within HP15_1333 at 1400.708 kb on - strand, within HP15_1333 at 1400.865 kb on - strand, within HP15_1333 at 1400.896 kb on - strand, within HP15_1333 at 1401.005 kb on - strand, within HP15_1333 at 1401.005 kb on - strand, within HP15_1333 at 1401.057 kb on + strand, within HP15_1333 at 1401.314 kb on - strand, within HP15_1333 at 1401.362 kb on - strand, within HP15_1333 at 1401.466 kb on + strand, within HP15_1333 at 1401.514 kb on + strand, within HP15_1333 at 1401.522 kb on - strand, within HP15_1333 at 1401.806 kb on + strand, within HP15_1333 at 1401.819 kb on - strand, within HP15_1333 at 1401.951 kb on - strand, within HP15_1333 at 1401.965 kb on - strand, within HP15_1333 at 1402.171 kb on + strand at 1402.179 kb on - strand at 1402.194 kb on - strand at 1402.194 kb on - strand at 1402.194 kb on - strand at 1402.225 kb on + strand at 1402.279 kb on - strand at 1402.419 kb on + strand at 1402.549 kb on + strand, within HP15_1334 at 1402.596 kb on + strand, within HP15_1334 at 1402.606 kb on + strand, within HP15_1334 at 1402.614 kb on - strand, within HP15_1334 at 1402.654 kb on - strand, within HP15_1334 at 1402.968 kb on + strand, within HP15_1334 at 1402.978 kb on + strand, within HP15_1334 at 1403.179 kb on - strand, within HP15_1334 at 1403.179 kb on - strand, within HP15_1334 at 1403.250 kb on + strand, within HP15_1334
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 1,398,192 - HP15_1332 0.29 -1.3 1,398,213 - HP15_1332 0.31 -0.7 1,398,365 + HP15_1332 0.42 -1.1 1,398,365 + HP15_1332 0.42 -0.3 1,398,575 - HP15_1332 0.58 -1.8 1,398,659 + HP15_1332 0.65 -2.3 1,398,712 + HP15_1332 0.69 -2.8 1,398,720 - HP15_1332 0.69 -1.6 1,398,763 - HP15_1332 0.72 -2.3 1,398,772 - HP15_1332 0.73 -2.3 1,398,951 - HP15_1332 0.87 -1.6 1,399,339 - -3.1 1,399,410 + -2.6 1,399,549 + HP15_1333 0.12 -3.3 1,399,562 - HP15_1333 0.12 -2.6 1,399,610 + HP15_1333 0.14 -2.3 1,399,641 + HP15_1333 0.15 -2.6 1,399,658 + HP15_1333 0.15 -2.6 1,399,678 - HP15_1333 0.16 -3.7 1,399,704 - HP15_1333 0.17 -4.9 1,399,771 - HP15_1333 0.19 -2.3 1,399,829 - HP15_1333 0.21 -2.3 1,400,001 - HP15_1333 0.26 -5.3 1,400,029 + HP15_1333 0.27 -5.6 1,400,031 + HP15_1333 0.27 +0.1 1,400,037 - HP15_1333 0.28 -3.4 1,400,349 + HP15_1333 0.38 -3.7 1,400,357 - HP15_1333 0.38 -1.7 1,400,357 - HP15_1333 0.38 -4.6 1,400,398 - HP15_1333 0.39 -2.6 1,400,398 - HP15_1333 0.39 -3.0 1,400,427 - HP15_1333 0.40 -3.3 1,400,672 - HP15_1333 0.48 -1.8 1,400,685 - HP15_1333 0.48 -2.6 1,400,695 + HP15_1333 0.49 -2.8 1,400,705 + HP15_1333 0.49 -4.6 1,400,708 - HP15_1333 0.49 -0.3 1,400,865 - HP15_1333 0.54 -1.8 1,400,896 - HP15_1333 0.55 -5.3 1,401,005 - HP15_1333 0.59 -2.4 1,401,005 - HP15_1333 0.59 -3.6 1,401,057 + HP15_1333 0.60 -1.8 1,401,314 - HP15_1333 0.69 -1.8 1,401,362 - HP15_1333 0.70 -1.3 1,401,466 + HP15_1333 0.73 -4.3 1,401,514 + HP15_1333 0.75 -5.5 1,401,522 - HP15_1333 0.75 -4.2 1,401,806 + HP15_1333 0.84 -2.8 1,401,819 - HP15_1333 0.85 -3.9 1,401,951 - HP15_1333 0.89 -5.3 1,401,965 - HP15_1333 0.89 -0.3 1,402,171 + -3.1 1,402,179 - -4.9 1,402,194 - -3.8 1,402,194 - -3.4 1,402,194 - -1.3 1,402,225 + -4.6 1,402,279 - -4.8 1,402,419 + -1.3 1,402,549 + HP15_1334 0.18 -2.3 1,402,596 + HP15_1334 0.21 -2.8 1,402,606 + HP15_1334 0.22 -2.8 1,402,614 - HP15_1334 0.22 -3.8 1,402,654 - HP15_1334 0.25 -4.8 1,402,968 + HP15_1334 0.47 -2.7 1,402,978 + HP15_1334 0.48 -5.8 1,403,179 - HP15_1334 0.62 -2.7 1,403,179 - HP15_1334 0.62 -2.8 1,403,250 + HP15_1334 0.67 -3.4
Or see this region's nucleotide sequence