Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_1041 and HP15_1042 are separated by 110 nucleotides HP15_1042 and HP15_1043 are separated by 106 nucleotides
HP15_1041: HP15_1041 - metal-dependent hydrolase, at 1,062,095 to 1,062,928
_1041
HP15_1042: HP15_1042 - DegV family protein, at 1,063,039 to 1,063,989
_1042
HP15_1043: HP15_1043 - conserved hypothetical protein, at 1,064,096 to 1,065,163
_1043
Position (kb)
1063
1064 Strain fitness (log2 ratio)
-1
0
1 at 1062.054 kb on + strand at 1062.108 kb on - strand at 1062.155 kb on - strand at 1062.302 kb on - strand, within HP15_1041 at 1062.309 kb on - strand, within HP15_1041 at 1062.370 kb on - strand, within HP15_1041 at 1062.405 kb on + strand, within HP15_1041 at 1062.426 kb on + strand, within HP15_1041 at 1062.436 kb on - strand, within HP15_1041 at 1062.568 kb on + strand, within HP15_1041 at 1062.568 kb on + strand, within HP15_1041 at 1062.576 kb on - strand, within HP15_1041 at 1062.576 kb on - strand, within HP15_1041 at 1062.724 kb on + strand, within HP15_1041 at 1062.732 kb on - strand, within HP15_1041 at 1062.792 kb on + strand, within HP15_1041 at 1062.793 kb on + strand, within HP15_1041 at 1062.801 kb on - strand, within HP15_1041 at 1062.846 kb on + strand at 1062.863 kb on - strand at 1062.910 kb on + strand at 1062.958 kb on + strand at 1062.958 kb on + strand at 1062.958 kb on + strand at 1062.958 kb on + strand at 1062.966 kb on - strand at 1062.966 kb on - strand at 1062.966 kb on - strand at 1062.966 kb on - strand at 1062.966 kb on - strand at 1063.076 kb on + strand at 1063.105 kb on - strand at 1063.151 kb on - strand, within HP15_1042 at 1063.246 kb on - strand, within HP15_1042 at 1063.359 kb on - strand, within HP15_1042 at 1063.382 kb on - strand, within HP15_1042 at 1063.392 kb on - strand, within HP15_1042 at 1063.441 kb on - strand, within HP15_1042 at 1063.478 kb on + strand, within HP15_1042 at 1063.478 kb on + strand, within HP15_1042 at 1063.528 kb on - strand, within HP15_1042 at 1063.528 kb on - strand, within HP15_1042 at 1063.557 kb on - strand, within HP15_1042 at 1063.557 kb on - strand, within HP15_1042 at 1063.573 kb on + strand, within HP15_1042 at 1063.595 kb on + strand, within HP15_1042 at 1063.609 kb on + strand, within HP15_1042 at 1063.617 kb on - strand, within HP15_1042 at 1063.692 kb on + strand, within HP15_1042 at 1063.695 kb on - strand, within HP15_1042 at 1063.726 kb on - strand, within HP15_1042 at 1063.737 kb on - strand, within HP15_1042 at 1063.790 kb on + strand, within HP15_1042 at 1063.790 kb on + strand, within HP15_1042 at 1063.790 kb on + strand, within HP15_1042 at 1063.794 kb on - strand, within HP15_1042 at 1063.798 kb on - strand, within HP15_1042 at 1063.798 kb on - strand, within HP15_1042 at 1063.800 kb on + strand, within HP15_1042 at 1063.808 kb on - strand, within HP15_1042 at 1063.808 kb on - strand, within HP15_1042 at 1063.885 kb on + strand, within HP15_1042 at 1063.897 kb on - strand at 1064.084 kb on + strand at 1064.084 kb on + strand at 1064.092 kb on - strand at 1064.315 kb on - strand, within HP15_1043 at 1064.350 kb on - strand, within HP15_1043 at 1064.352 kb on + strand, within HP15_1043 at 1064.360 kb on - strand, within HP15_1043 at 1064.386 kb on + strand, within HP15_1043 at 1064.474 kb on - strand, within HP15_1043 at 1064.526 kb on + strand, within HP15_1043 at 1064.534 kb on - strand, within HP15_1043 at 1064.763 kb on + strand, within HP15_1043 at 1064.764 kb on - strand, within HP15_1043 at 1064.823 kb on + strand, within HP15_1043 at 1064.873 kb on + strand, within HP15_1043 at 1064.909 kb on + strand, within HP15_1043
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 1,062,054 + -1.1 1,062,108 - -0.6 1,062,155 - -0.4 1,062,302 - HP15_1041 0.25 -0.1 1,062,309 - HP15_1041 0.26 +1.5 1,062,370 - HP15_1041 0.33 -0.1 1,062,405 + HP15_1041 0.37 +0.4 1,062,426 + HP15_1041 0.40 -0.3 1,062,436 - HP15_1041 0.41 +0.4 1,062,568 + HP15_1041 0.57 +0.0 1,062,568 + HP15_1041 0.57 +0.7 1,062,576 - HP15_1041 0.58 -0.4 1,062,576 - HP15_1041 0.58 +0.0 1,062,724 + HP15_1041 0.75 +0.7 1,062,732 - HP15_1041 0.76 -0.6 1,062,792 + HP15_1041 0.84 +0.3 1,062,793 + HP15_1041 0.84 +0.9 1,062,801 - HP15_1041 0.85 +1.3 1,062,846 + -0.0 1,062,863 - +0.1 1,062,910 + -1.3 1,062,958 + -0.4 1,062,958 + +0.6 1,062,958 + -1.0 1,062,958 + -1.5 1,062,966 - +0.3 1,062,966 - +1.0 1,062,966 - -0.7 1,062,966 - -0.7 1,062,966 - -1.7 1,063,076 + +0.0 1,063,105 - +0.7 1,063,151 - HP15_1042 0.12 -0.6 1,063,246 - HP15_1042 0.22 -0.9 1,063,359 - HP15_1042 0.34 -0.7 1,063,382 - HP15_1042 0.36 +0.0 1,063,392 - HP15_1042 0.37 +0.6 1,063,441 - HP15_1042 0.42 +0.1 1,063,478 + HP15_1042 0.46 -0.1 1,063,478 + HP15_1042 0.46 -0.8 1,063,528 - HP15_1042 0.51 +1.1 1,063,528 - HP15_1042 0.51 -0.5 1,063,557 - HP15_1042 0.54 +0.7 1,063,557 - HP15_1042 0.54 -0.3 1,063,573 + HP15_1042 0.56 -0.3 1,063,595 + HP15_1042 0.58 -0.8 1,063,609 + HP15_1042 0.60 +0.3 1,063,617 - HP15_1042 0.61 +0.1 1,063,692 + HP15_1042 0.69 +0.0 1,063,695 - HP15_1042 0.69 +0.0 1,063,726 - HP15_1042 0.72 -0.7 1,063,737 - HP15_1042 0.73 +0.1 1,063,790 + HP15_1042 0.79 -1.3 1,063,790 + HP15_1042 0.79 -0.3 1,063,790 + HP15_1042 0.79 +0.9 1,063,794 - HP15_1042 0.79 +0.4 1,063,798 - HP15_1042 0.80 +0.1 1,063,798 - HP15_1042 0.80 -0.3 1,063,800 + HP15_1042 0.80 -0.1 1,063,808 - HP15_1042 0.81 -0.0 1,063,808 - HP15_1042 0.81 -0.3 1,063,885 + HP15_1042 0.89 -0.4 1,063,897 - +0.5 1,064,084 + -0.4 1,064,084 + +0.1 1,064,092 - -0.8 1,064,315 - HP15_1043 0.21 +0.4 1,064,350 - HP15_1043 0.24 +0.4 1,064,352 + HP15_1043 0.24 +0.5 1,064,360 - HP15_1043 0.25 -0.6 1,064,386 + HP15_1043 0.27 -0.1 1,064,474 - HP15_1043 0.35 -0.0 1,064,526 + HP15_1043 0.40 +0.4 1,064,534 - HP15_1043 0.41 +0.7 1,064,763 + HP15_1043 0.62 -0.5 1,064,764 - HP15_1043 0.63 +1.2 1,064,823 + HP15_1043 0.68 -1.7 1,064,873 + HP15_1043 0.73 -0.1 1,064,909 + HP15_1043 0.76 -1.3
Or see this region's nucleotide sequence