Experiment: ALP with Fusidic 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3459 and Dsui_3460 are separated by 1 nucleotides Dsui_3460 and Dsui_3461 are separated by 150 nucleotides Dsui_3461 and Dsui_3462 are separated by 335 nucleotides
Dsui_3459: Dsui_3459 - septum site-determining protein MinD, at 3,722,111 to 3,722,923
_3459
Dsui_3460: Dsui_3460 - cell division topological specificity factor MinE, at 3,722,925 to 3,723,191
_3460
Dsui_3461: Dsui_3461 - hypothetical protein, at 3,723,342 to 3,724,892
_3461
Dsui_3462: Dsui_3462 - ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component, at 3,725,228 to 3,726,214
_3462
Position (kb)
3723
3724
3725 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3722.346 kb on + strand, within Dsui_3459 at 3722.444 kb on + strand, within Dsui_3459 at 3722.590 kb on + strand, within Dsui_3459 at 3722.649 kb on + strand, within Dsui_3459 at 3722.649 kb on - strand at 3722.691 kb on + strand, within Dsui_3459 at 3722.766 kb on + strand, within Dsui_3459 at 3722.861 kb on + strand at 3723.247 kb on + strand at 3723.459 kb on - strand at 3723.759 kb on + strand at 3723.831 kb on + strand, within Dsui_3461 at 3723.884 kb on + strand, within Dsui_3461 at 3723.908 kb on + strand at 3723.913 kb on + strand at 3723.921 kb on - strand, within Dsui_3461 at 3724.019 kb on - strand at 3724.093 kb on + strand at 3724.150 kb on + strand at 3724.150 kb on + strand at 3724.158 kb on - strand at 3724.306 kb on - strand at 3724.367 kb on + strand at 3724.409 kb on - strand at 3724.744 kb on + strand at 3724.800 kb on + strand at 3724.808 kb on - strand at 3725.027 kb on - strand at 3725.027 kb on - strand at 3725.095 kb on + strand at 3725.103 kb on - strand at 3725.154 kb on + strand at 3725.251 kb on - strand at 3725.313 kb on + strand at 3725.347 kb on + strand, within Dsui_3462 at 3725.397 kb on + strand, within Dsui_3462 at 3725.464 kb on - strand at 3725.503 kb on + strand, within Dsui_3462 at 3725.526 kb on - strand at 3725.526 kb on - strand, within Dsui_3462 at 3725.594 kb on - strand, within Dsui_3462 at 3725.624 kb on + strand, within Dsui_3462 at 3725.888 kb on + strand, within Dsui_3462
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Fusidic 0.02 mg/ml remove 3,722,346 + Dsui_3459 0.29 -0.5 3,722,444 + Dsui_3459 0.41 -0.7 3,722,590 + Dsui_3459 0.59 -0.8 3,722,649 + Dsui_3459 0.66 -0.8 3,722,649 - +0.7 3,722,691 + Dsui_3459 0.71 -0.8 3,722,766 + Dsui_3459 0.81 -0.8 3,722,861 + -0.7 3,723,247 + -2.3 3,723,459 - -0.3 3,723,759 + +0.7 3,723,831 + Dsui_3461 0.32 -0.9 3,723,884 + Dsui_3461 0.35 -2.8 3,723,908 + +0.7 3,723,913 + +0.7 3,723,921 - Dsui_3461 0.37 +0.7 3,724,019 - +0.7 3,724,093 + +0.7 3,724,150 + -0.3 3,724,150 + +0.7 3,724,158 - -0.3 3,724,306 - -0.3 3,724,367 + -0.9 3,724,409 - -0.3 3,724,744 + +0.7 3,724,800 + -0.3 3,724,808 - -0.3 3,725,027 - -0.3 3,725,027 - +0.7 3,725,095 + +0.7 3,725,103 - +0.7 3,725,154 + +0.7 3,725,251 - -0.3 3,725,313 + +0.7 3,725,347 + Dsui_3462 0.12 -0.3 3,725,397 + Dsui_3462 0.17 +0.7 3,725,464 - +0.7 3,725,503 + Dsui_3462 0.28 -0.9 3,725,526 - +0.7 3,725,526 - Dsui_3462 0.30 -0.3 3,725,594 - Dsui_3462 0.37 -0.3 3,725,624 + Dsui_3462 0.40 -0.9 3,725,888 + Dsui_3462 0.67 +0.7
Or see this region's nucleotide sequence