Experiment: ALP with Fusidic 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3457 and Dsui_3458 are separated by 308 nucleotides Dsui_3458 and Dsui_3459 are separated by 46 nucleotides Dsui_3459 and Dsui_3460 are separated by 1 nucleotides
Dsui_3457: Dsui_3457 - K+ transporter, at 3,719,036 to 3,720,919
_3457
Dsui_3458: Dsui_3458 - septum site-determining protein MinC, at 3,721,228 to 3,722,064
_3458
Dsui_3459: Dsui_3459 - septum site-determining protein MinD, at 3,722,111 to 3,722,923
_3459
Dsui_3460: Dsui_3460 - cell division topological specificity factor MinE, at 3,722,925 to 3,723,191
_3460
Position (kb)
3721
3722
3723 Strain fitness (log2 ratio)
-1
0
1
2
3
4 at 3720.235 kb on - strand, within Dsui_3457 at 3721.072 kb on + strand at 3721.173 kb on + strand at 3721.181 kb on - strand at 3721.233 kb on - strand at 3721.502 kb on - strand, within Dsui_3458 at 3721.636 kb on + strand, within Dsui_3458 at 3721.770 kb on + strand, within Dsui_3458 at 3721.827 kb on + strand, within Dsui_3458 at 3721.874 kb on - strand at 3721.967 kb on + strand, within Dsui_3458 at 3722.050 kb on + strand at 3722.057 kb on - strand at 3722.057 kb on - strand at 3722.083 kb on + strand at 3722.083 kb on + strand at 3722.083 kb on + strand at 3722.083 kb on + strand at 3722.091 kb on - strand at 3722.091 kb on - strand at 3722.184 kb on + strand at 3722.186 kb on - strand at 3722.192 kb on - strand at 3722.241 kb on + strand, within Dsui_3459 at 3722.241 kb on + strand, within Dsui_3459 at 3722.249 kb on - strand at 3722.346 kb on + strand, within Dsui_3459 at 3722.444 kb on + strand, within Dsui_3459 at 3722.590 kb on + strand, within Dsui_3459 at 3722.649 kb on + strand, within Dsui_3459 at 3722.649 kb on - strand at 3722.691 kb on + strand, within Dsui_3459 at 3722.766 kb on + strand, within Dsui_3459 at 3722.861 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Fusidic 0.02 mg/ml remove 3,720,235 - Dsui_3457 0.64 +3.8 3,721,072 + +0.7 3,721,173 + -0.9 3,721,181 - +0.1 3,721,233 - -1.7 3,721,502 - Dsui_3458 0.33 +0.7 3,721,636 + Dsui_3458 0.49 -0.8 3,721,770 + Dsui_3458 0.65 -0.6 3,721,827 + Dsui_3458 0.72 -0.7 3,721,874 - +0.7 3,721,967 + Dsui_3458 0.88 -1.5 3,722,050 + +0.1 3,722,057 - -1.3 3,722,057 - +0.7 3,722,083 + +0.4 3,722,083 + -0.6 3,722,083 + -0.7 3,722,083 + -1.0 3,722,091 - +0.7 3,722,091 - -0.3 3,722,184 + -0.4 3,722,186 - +0.7 3,722,192 - -1.7 3,722,241 + Dsui_3459 0.16 -0.9 3,722,241 + Dsui_3459 0.16 -1.0 3,722,249 - +0.7 3,722,346 + Dsui_3459 0.29 -0.5 3,722,444 + Dsui_3459 0.41 -0.7 3,722,590 + Dsui_3459 0.59 -0.8 3,722,649 + Dsui_3459 0.66 -0.8 3,722,649 - +0.7 3,722,691 + Dsui_3459 0.71 -0.8 3,722,766 + Dsui_3459 0.81 -0.8 3,722,861 + -0.7
Or see this region's nucleotide sequence