Strain Fitness in Dechlorosoma suillum PS around Dsui_3456
Experiment: ALP with Fusidic 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | ALP with Fusidic 0.02 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,717,661 | - | Dsui_3455 | 0.75 | +0.7 | |
3,717,795 | - | -0.3 | |||
3,717,865 | - | Dsui_3455 | 0.82 | +0.3 | |
3,717,896 | - | Dsui_3455 | 0.83 | -0.9 | |
3,718,144 | + | +0.7 | |||
3,718,240 | + | -0.3 | |||
3,718,248 | - | +0.7 | |||
3,718,318 | + | -2.1 | |||
3,718,319 | - | -0.9 | |||
3,718,351 | - | -0.3 | |||
3,718,351 | - | -0.9 | |||
3,718,351 | - | +0.7 | |||
3,718,433 | + | -1.9 | |||
3,718,433 | + | -3.0 | |||
3,718,440 | + | -0.9 | |||
3,718,563 | - | -0.3 | |||
3,718,718 | + | Dsui_3456 | 0.35 | -0.3 | |
3,718,810 | + | Dsui_3456 | 0.60 | -0.7 | |
3,718,810 | + | Dsui_3456 | 0.60 | -1.3 | |
3,718,830 | - | Dsui_3456 | 0.65 | -1.3 | |
3,718,867 | + | Dsui_3456 | 0.75 | -1.3 | |
3,719,033 | + | +0.7 | |||
3,719,052 | - | +2.3 | |||
3,719,223 | - | +4.1 | |||
3,719,555 | - | Dsui_3457 | 0.28 | +3.9 | |
3,719,779 | - | Dsui_3457 | 0.39 | +3.8 |
Or see this region's nucleotide sequence