Strain Fitness in Dechlorosoma suillum PS around Dsui_3452
Experiment: ALP with Fusidic 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | ALP with Fusidic 0.02 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,712,452 | + | Dsui_3451 | 0.37 | -0.9 | |
3,712,487 | - | Dsui_3451 | 0.40 | +0.7 | |
3,712,494 | + | Dsui_3451 | 0.40 | +0.7 | |
3,712,519 | + | Dsui_3451 | 0.42 | +0.7 | |
3,712,608 | - | Dsui_3451 | 0.49 | -0.9 | |
3,712,655 | + | Dsui_3451 | 0.53 | -2.3 | |
3,712,655 | + | Dsui_3451 | 0.53 | +0.7 | |
3,712,716 | - | Dsui_3451 | 0.58 | -1.3 | |
3,712,930 | + | Dsui_3451 | 0.74 | -1.9 | |
3,712,941 | + | +0.7 | |||
3,713,027 | - | Dsui_3451 | 0.82 | -0.3 | |
3,713,027 | - | Dsui_3451 | 0.82 | -2.1 | |
3,713,070 | - | Dsui_3451 | 0.85 | -0.3 | |
3,713,122 | + | -0.9 | |||
3,713,133 | + | -2.5 | |||
3,713,135 | - | -2.1 | |||
3,713,220 | - | -0.3 | |||
3,713,273 | - | -1.5 | |||
3,713,319 | - | -0.7 | |||
3,713,347 | + | -0.9 | |||
3,713,918 | + | +0.1 | |||
3,713,926 | - | -0.3 | |||
3,714,032 | - | Dsui_3453 | 0.11 | +1.3 | |
3,714,104 | - | Dsui_3453 | 0.19 | -1.7 | |
3,714,217 | + | Dsui_3453 | 0.31 | -0.1 | |
3,714,477 | + | Dsui_3453 | 0.60 | +0.7 | |
3,714,628 | + | Dsui_3453 | 0.76 | -0.2 | |
3,714,821 | + | +0.3 |
Or see this region's nucleotide sequence