Experiment: ALP with Fusidic 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3344 and Dsui_3345 are separated by 10 nucleotides Dsui_3345 and Dsui_3346 are separated by 5 nucleotides
Dsui_3344: Dsui_3344 - phosphomannomutase, at 3,582,780 to 3,584,174
_3344
Dsui_3345: Dsui_3345 - putative signal transduction protein containing EAL and modified HD-GYP domains, at 3,584,185 to 3,585,429
_3345
Dsui_3346: Dsui_3346 - putative signal transduction protein containing EAL and modified HD-GYP domains, at 3,585,435 to 3,586,697
_3346
Position (kb)
3584
3585
3586 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3584.221 kb on + strand at 3584.233 kb on - strand at 3584.266 kb on + strand at 3584.354 kb on + strand, within Dsui_3345 at 3584.402 kb on - strand, within Dsui_3345 at 3584.497 kb on + strand, within Dsui_3345 at 3584.647 kb on + strand, within Dsui_3345 at 3584.675 kb on + strand, within Dsui_3345 at 3584.714 kb on + strand, within Dsui_3345 at 3584.719 kb on + strand, within Dsui_3345 at 3584.726 kb on + strand, within Dsui_3345 at 3584.726 kb on + strand, within Dsui_3345 at 3584.726 kb on + strand, within Dsui_3345 at 3584.731 kb on + strand, within Dsui_3345 at 3584.734 kb on - strand, within Dsui_3345 at 3584.834 kb on + strand, within Dsui_3345 at 3584.908 kb on - strand, within Dsui_3345 at 3584.908 kb on - strand, within Dsui_3345 at 3585.021 kb on + strand, within Dsui_3345 at 3585.527 kb on + strand at 3585.583 kb on + strand, within Dsui_3346 at 3585.591 kb on + strand, within Dsui_3346 at 3585.625 kb on - strand, within Dsui_3346 at 3585.676 kb on + strand, within Dsui_3346 at 3585.707 kb on + strand, within Dsui_3346 at 3585.715 kb on - strand, within Dsui_3346 at 3585.715 kb on - strand, within Dsui_3346 at 3585.715 kb on - strand, within Dsui_3346 at 3585.736 kb on + strand, within Dsui_3346 at 3585.736 kb on + strand, within Dsui_3346 at 3585.748 kb on + strand, within Dsui_3346 at 3585.751 kb on - strand, within Dsui_3346 at 3585.766 kb on - strand at 3585.769 kb on + strand, within Dsui_3346 at 3585.790 kb on + strand, within Dsui_3346 at 3585.798 kb on - strand, within Dsui_3346 at 3585.885 kb on - strand at 3585.964 kb on + strand, within Dsui_3346 at 3586.031 kb on + strand, within Dsui_3346 at 3586.031 kb on + strand, within Dsui_3346 at 3586.041 kb on - strand at 3586.106 kb on - strand, within Dsui_3346 at 3586.108 kb on + strand, within Dsui_3346 at 3586.117 kb on + strand, within Dsui_3346 at 3586.136 kb on - strand, within Dsui_3346 at 3586.192 kb on - strand, within Dsui_3346 at 3586.224 kb on - strand, within Dsui_3346
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Fusidic 0.02 mg/ml remove 3,584,221 + +0.2 3,584,233 - +0.7 3,584,266 + +0.1 3,584,354 + Dsui_3345 0.14 -1.0 3,584,402 - Dsui_3345 0.17 -0.3 3,584,497 + Dsui_3345 0.25 -0.1 3,584,647 + Dsui_3345 0.37 +2.4 3,584,675 + Dsui_3345 0.39 +1.0 3,584,714 + Dsui_3345 0.42 -0.2 3,584,719 + Dsui_3345 0.43 +1.5 3,584,726 + Dsui_3345 0.43 +0.5 3,584,726 + Dsui_3345 0.43 -0.3 3,584,726 + Dsui_3345 0.43 -0.0 3,584,731 + Dsui_3345 0.44 +0.2 3,584,734 - Dsui_3345 0.44 -0.9 3,584,834 + Dsui_3345 0.52 -0.7 3,584,908 - Dsui_3345 0.58 +0.7 3,584,908 - Dsui_3345 0.58 -2.1 3,585,021 + Dsui_3345 0.67 +0.9 3,585,527 + -0.6 3,585,583 + Dsui_3346 0.12 -0.3 3,585,591 + Dsui_3346 0.12 -0.1 3,585,625 - Dsui_3346 0.15 -0.9 3,585,676 + Dsui_3346 0.19 -2.9 3,585,707 + Dsui_3346 0.22 +1.3 3,585,715 - Dsui_3346 0.22 +0.7 3,585,715 - Dsui_3346 0.22 -0.3 3,585,715 - Dsui_3346 0.22 -1.3 3,585,736 + Dsui_3346 0.24 +0.3 3,585,736 + Dsui_3346 0.24 +0.7 3,585,748 + Dsui_3346 0.25 +1.5 3,585,751 - Dsui_3346 0.25 -1.3 3,585,766 - -0.3 3,585,769 + Dsui_3346 0.26 +0.1 3,585,790 + Dsui_3346 0.28 -0.2 3,585,798 - Dsui_3346 0.29 -0.3 3,585,885 - +0.7 3,585,964 + Dsui_3346 0.42 +1.3 3,586,031 + Dsui_3346 0.47 -0.3 3,586,031 + Dsui_3346 0.47 -3.3 3,586,041 - +0.7 3,586,106 - Dsui_3346 0.53 -0.6 3,586,108 + Dsui_3346 0.53 -0.9 3,586,117 + Dsui_3346 0.54 +0.7 3,586,136 - Dsui_3346 0.56 -0.9 3,586,192 - Dsui_3346 0.60 +0.7 3,586,224 - Dsui_3346 0.62 -0.9
Or see this region's nucleotide sequence