Experiment: ALP with Fusidic 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3231 and Dsui_3232 are separated by 253 nucleotides Dsui_3232 and Dsui_3233 are separated by 14 nucleotides Dsui_3233 and Dsui_3234 are separated by 69 nucleotides
Dsui_3231: Dsui_3231 - hypothetical protein, at 3,471,239 to 3,474,592
_3231
Dsui_3232: Dsui_3232 - activator of osmoprotectant transporter ProP, at 3,474,846 to 3,475,268
_3232
Dsui_3233: Dsui_3233 - hypothetical protein, at 3,475,283 to 3,475,750
_3233
Dsui_3234: Dsui_3234 - putative proteasome-type protease, at 3,475,820 to 3,476,548
_3234
Position (kb)
3474
3475
3476 Strain fitness (log2 ratio)
-2
-1
0
1 at 3473.888 kb on + strand, within Dsui_3231 at 3473.893 kb on - strand, within Dsui_3231 at 3474.080 kb on + strand at 3474.090 kb on - strand at 3474.147 kb on - strand at 3474.435 kb on - strand at 3474.491 kb on + strand at 3474.499 kb on - strand at 3474.584 kb on + strand at 3474.599 kb on + strand at 3474.607 kb on - strand at 3474.719 kb on - strand at 3474.811 kb on + strand at 3474.850 kb on + strand at 3474.973 kb on - strand at 3475.117 kb on + strand, within Dsui_3232 at 3475.139 kb on + strand, within Dsui_3232 at 3475.195 kb on - strand, within Dsui_3232 at 3475.278 kb on - strand at 3475.573 kb on + strand, within Dsui_3233 at 3475.581 kb on - strand, within Dsui_3233 at 3475.665 kb on - strand at 3475.667 kb on + strand, within Dsui_3233 at 3475.725 kb on - strand at 3475.766 kb on + strand at 3475.774 kb on - strand at 3475.831 kb on - strand at 3475.935 kb on + strand, within Dsui_3234 at 3475.935 kb on + strand, within Dsui_3234 at 3475.990 kb on + strand, within Dsui_3234 at 3476.041 kb on + strand, within Dsui_3234 at 3476.041 kb on + strand at 3476.041 kb on + strand, within Dsui_3234 at 3476.042 kb on + strand, within Dsui_3234 at 3476.130 kb on - strand, within Dsui_3234 at 3476.169 kb on + strand, within Dsui_3234 at 3476.184 kb on + strand, within Dsui_3234
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Fusidic 0.02 mg/ml remove 3,473,888 + Dsui_3231 0.79 -0.9 3,473,893 - Dsui_3231 0.79 +0.7 3,474,080 + -0.3 3,474,090 - +0.7 3,474,147 - -0.9 3,474,435 - -0.3 3,474,491 + +0.7 3,474,499 - -0.9 3,474,584 + -1.3 3,474,599 + +0.7 3,474,607 - -2.1 3,474,719 - +0.7 3,474,811 + +0.0 3,474,850 + +1.4 3,474,973 - +0.7 3,475,117 + Dsui_3232 0.64 +1.4 3,475,139 + Dsui_3232 0.69 +1.4 3,475,195 - Dsui_3232 0.83 -1.6 3,475,278 - +0.7 3,475,573 + Dsui_3233 0.62 -0.2 3,475,581 - Dsui_3233 0.64 -0.9 3,475,665 - -0.9 3,475,667 + Dsui_3233 0.82 -0.6 3,475,725 - +0.7 3,475,766 + -0.7 3,475,774 - -0.9 3,475,831 - -0.3 3,475,935 + Dsui_3234 0.16 -0.3 3,475,935 + Dsui_3234 0.16 -2.6 3,475,990 + Dsui_3234 0.23 -2.5 3,476,041 + Dsui_3234 0.30 +0.7 3,476,041 + +0.7 3,476,041 + Dsui_3234 0.30 -0.3 3,476,042 + Dsui_3234 0.30 -0.3 3,476,130 - Dsui_3234 0.43 -1.9 3,476,169 + Dsui_3234 0.48 +0.7 3,476,184 + Dsui_3234 0.50 -1.6
Or see this region's nucleotide sequence