Experiment: ALP with Fusidic 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3155 and Dsui_3156 are separated by 176 nucleotides Dsui_3156 and Dsui_3157 are separated by 187 nucleotides
Dsui_3155: Dsui_3155 - tripartite ATP-independent periplasmic transporter solute receptor, DctP family, at 3,377,365 to 3,378,363
_3155
Dsui_3156: Dsui_3156 - putative permease, at 3,378,540 to 3,379,313
_3156
Dsui_3157: Dsui_3157 - Fatty acid cis/trans isomerase (CTI), at 3,379,501 to 3,381,852
_3157
Position (kb)
3378
3379
3380 Strain fitness (log2 ratio)
-2
-1
0
1 at 3377.542 kb on + strand, within Dsui_3155 at 3377.542 kb on + strand, within Dsui_3155 at 3377.774 kb on + strand, within Dsui_3155 at 3377.782 kb on - strand, within Dsui_3155 at 3377.792 kb on - strand, within Dsui_3155 at 3378.002 kb on + strand, within Dsui_3155 at 3378.038 kb on + strand, within Dsui_3155 at 3378.080 kb on + strand, within Dsui_3155 at 3378.080 kb on - strand, within Dsui_3155 at 3378.119 kb on + strand, within Dsui_3155 at 3378.126 kb on + strand, within Dsui_3155 at 3378.178 kb on + strand at 3378.392 kb on + strand at 3378.417 kb on - strand at 3378.417 kb on - strand at 3378.427 kb on - strand at 3378.806 kb on - strand, within Dsui_3156 at 3378.892 kb on + strand, within Dsui_3156 at 3378.927 kb on - strand, within Dsui_3156 at 3378.946 kb on + strand, within Dsui_3156 at 3379.059 kb on + strand, within Dsui_3156 at 3379.065 kb on - strand, within Dsui_3156 at 3379.162 kb on + strand, within Dsui_3156 at 3379.170 kb on - strand at 3379.173 kb on - strand, within Dsui_3156 at 3379.186 kb on + strand, within Dsui_3156 at 3379.270 kb on - strand at 3379.293 kb on + strand at 3379.395 kb on + strand at 3379.463 kb on + strand at 3379.463 kb on + strand at 3379.480 kb on + strand at 3379.480 kb on + strand at 3379.733 kb on + strand at 3379.906 kb on + strand, within Dsui_3157 at 3380.159 kb on - strand, within Dsui_3157 at 3380.256 kb on - strand, within Dsui_3157 at 3380.261 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Fusidic 0.02 mg/ml remove 3,377,542 + Dsui_3155 0.18 -2.6 3,377,542 + Dsui_3155 0.18 +0.7 3,377,774 + Dsui_3155 0.41 -0.3 3,377,782 - Dsui_3155 0.42 -0.4 3,377,792 - Dsui_3155 0.43 +0.3 3,378,002 + Dsui_3155 0.64 -1.3 3,378,038 + Dsui_3155 0.67 +0.7 3,378,080 + Dsui_3155 0.72 -0.9 3,378,080 - Dsui_3155 0.72 +0.3 3,378,119 + Dsui_3155 0.75 +0.7 3,378,126 + Dsui_3155 0.76 -0.9 3,378,178 + +0.7 3,378,392 + -1.3 3,378,417 - -0.3 3,378,417 - +0.8 3,378,427 - +0.1 3,378,806 - Dsui_3156 0.34 -1.3 3,378,892 + Dsui_3156 0.45 -0.3 3,378,927 - Dsui_3156 0.50 -1.3 3,378,946 + Dsui_3156 0.52 +0.7 3,379,059 + Dsui_3156 0.67 -1.9 3,379,065 - Dsui_3156 0.68 -0.3 3,379,162 + Dsui_3156 0.80 -0.3 3,379,170 - -0.3 3,379,173 - Dsui_3156 0.82 -0.3 3,379,186 + Dsui_3156 0.83 -1.6 3,379,270 - +0.7 3,379,293 + -0.3 3,379,395 + -0.6 3,379,463 + +0.7 3,379,463 + -0.3 3,379,480 + -0.9 3,379,480 + -0.9 3,379,733 + -0.9 3,379,906 + Dsui_3157 0.17 -0.3 3,380,159 - Dsui_3157 0.28 -0.9 3,380,256 - Dsui_3157 0.32 -0.9 3,380,261 - +0.7
Or see this region's nucleotide sequence