Strain Fitness in Dechlorosoma suillum PS around Dsui_3122
Experiment: ALP with Fusidic 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | ALP with Fusidic 0.02 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,343,088 | - | -0.9 | |||
3,343,090 | + | +1.7 | |||
3,343,104 | - | -2.6 | |||
3,343,174 | - | -0.9 | |||
3,343,314 | + | Dsui_3121 | 0.27 | +0.7 | |
3,343,320 | - | Dsui_3121 | 0.28 | -0.9 | |
3,343,597 | + | Dsui_3121 | 0.66 | -0.9 | |
3,343,814 | + | +0.7 | |||
3,343,942 | - | +0.7 | |||
3,344,024 | - | -0.9 | |||
3,344,090 | - | +0.7 | |||
3,344,115 | + | +0.1 | |||
3,344,294 | + | Dsui_3122 | 0.42 | +0.7 | |
3,344,294 | + | Dsui_3122 | 0.42 | +0.2 | |
3,344,427 | + | Dsui_3122 | 0.67 | +0.1 | |
3,344,432 | + | Dsui_3122 | 0.68 | -0.1 | |
3,344,446 | - | +0.7 | |||
3,344,537 | - | Dsui_3122 | 0.88 | -2.7 | |
3,344,561 | - | -1.3 | |||
3,344,566 | - | -2.5 | |||
3,344,578 | - | -1.3 | |||
3,344,733 | + | Dsui_3123 | 0.12 | -0.1 | |
3,344,765 | + | Dsui_3123 | 0.15 | -1.0 | |
3,344,773 | - | Dsui_3123 | 0.15 | -0.9 | |
3,344,945 | - | Dsui_3123 | 0.29 | -0.3 | |
3,345,256 | - | Dsui_3123 | 0.53 | -2.3 | |
3,345,377 | + | Dsui_3123 | 0.62 | +0.0 | |
3,345,428 | + | Dsui_3123 | 0.66 | -0.6 | |
3,345,459 | - | Dsui_3123 | 0.68 | -3.1 | |
3,345,596 | - | Dsui_3123 | 0.79 | -0.3 |
Or see this region's nucleotide sequence