Strain Fitness in Dechlorosoma suillum PS around Dsui_3074
Experiment: ALP with Fusidic 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | ALP with Fusidic 0.02 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 3,289,636 | - | -0.8 | |||
| 3,289,762 | + | -1.0 | |||
| 3,289,783 | + | -0.5 | |||
| 3,289,907 | + | Dsui_3074 | 0.17 | -0.6 | |
| 3,289,907 | + | Dsui_3074 | 0.17 | -1.0 | |
| 3,289,937 | + | Dsui_3074 | 0.20 | -0.9 | |
| 3,290,023 | + | Dsui_3074 | 0.28 | -1.0 | |
| 3,290,058 | + | Dsui_3074 | 0.31 | -0.4 | |
| 3,290,159 | + | Dsui_3074 | 0.41 | -0.8 | |
| 3,290,195 | - | +0.7 | |||
| 3,290,278 | + | Dsui_3074 | 0.53 | -1.1 | |
| 3,290,375 | - | Dsui_3074 | 0.62 | -0.3 | |
| 3,290,411 | + | Dsui_3074 | 0.66 | -0.4 | |
| 3,290,414 | - | Dsui_3074 | 0.66 | +0.7 | |
| 3,290,489 | + | Dsui_3074 | 0.73 | -0.4 | |
| 3,290,497 | - | Dsui_3074 | 0.74 | +0.7 | |
| 3,290,507 | - | Dsui_3074 | 0.75 | +0.7 | |
| 3,290,563 | + | Dsui_3074 | 0.80 | -1.3 | |
| 3,290,640 | + | Dsui_3074 | 0.88 | -0.6 | |
| 3,290,684 | + | -0.4 | |||
| 3,290,684 | + | -0.6 | |||
| 3,290,721 | - | +0.7 | |||
| 3,290,726 | - | +0.7 | |||
| 3,290,728 | + | -3.2 | |||
| 3,290,728 | + | -0.6 | |||
| 3,290,741 | - | +0.7 | |||
| 3,290,753 | + | +0.1 | |||
| 3,290,753 | + | -0.3 |
Or see this region's nucleotide sequence