Experiment: ALP with Fusidic 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2944 and Dsui_2945 are separated by 313 nucleotides Dsui_2945 and Dsui_2946 overlap by 1 nucleotides
Dsui_2944: Dsui_2944 - diguanylate cyclase (GGDEF) domain-containing protein, at 3,149,972 to 3,151,684
_2944
Dsui_2945: Dsui_2945 - hypothetical protein, at 3,151,998 to 3,152,486
_2945
Dsui_2946: Dsui_2946 - DNA/RNA helicase, superfamily II, at 3,152,486 to 3,153,916
_2946
Position (kb)
3151
3152
3153 Strain fitness (log2 ratio)
-1
0
1 at 3151.159 kb on + strand, within Dsui_2944 at 3151.159 kb on + strand, within Dsui_2944 at 3151.160 kb on + strand, within Dsui_2944 at 3151.160 kb on + strand, within Dsui_2944 at 3151.369 kb on - strand, within Dsui_2944 at 3151.557 kb on + strand at 3151.617 kb on - strand at 3151.629 kb on - strand at 3151.786 kb on - strand at 3151.811 kb on + strand at 3151.870 kb on - strand at 3151.907 kb on - strand at 3151.950 kb on - strand at 3151.955 kb on + strand at 3151.963 kb on + strand at 3151.975 kb on + strand at 3151.983 kb on - strand at 3152.125 kb on + strand, within Dsui_2945 at 3152.174 kb on - strand at 3152.347 kb on - strand at 3152.353 kb on + strand, within Dsui_2945 at 3152.372 kb on + strand, within Dsui_2945 at 3152.407 kb on + strand, within Dsui_2945 at 3152.408 kb on + strand, within Dsui_2945 at 3152.408 kb on + strand, within Dsui_2945 at 3152.437 kb on - strand at 3152.658 kb on + strand, within Dsui_2946 at 3152.712 kb on + strand, within Dsui_2946 at 3152.712 kb on + strand, within Dsui_2946 at 3152.730 kb on - strand at 3152.767 kb on + strand, within Dsui_2946 at 3152.778 kb on + strand, within Dsui_2946 at 3152.810 kb on - strand at 3152.961 kb on + strand, within Dsui_2946 at 3152.965 kb on + strand, within Dsui_2946 at 3152.993 kb on - strand at 3153.070 kb on + strand, within Dsui_2946 at 3153.308 kb on - strand, within Dsui_2946 at 3153.308 kb on - strand at 3153.308 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Fusidic 0.02 mg/ml remove 3,151,159 + Dsui_2944 0.69 +0.1 3,151,159 + Dsui_2944 0.69 +0.4 3,151,160 + Dsui_2944 0.69 -0.2 3,151,160 + Dsui_2944 0.69 -0.0 3,151,369 - Dsui_2944 0.82 -0.7 3,151,557 + -0.5 3,151,617 - +0.8 3,151,629 - +0.8 3,151,786 - +0.8 3,151,811 + +0.2 3,151,870 - +0.8 3,151,907 - -0.2 3,151,950 - -0.2 3,151,955 + +0.1 3,151,963 + +0.5 3,151,975 + +0.2 3,151,983 - -0.8 3,152,125 + Dsui_2945 0.26 +1.0 3,152,174 - +0.8 3,152,347 - -0.2 3,152,353 + Dsui_2945 0.73 +0.2 3,152,372 + Dsui_2945 0.76 +0.8 3,152,407 + Dsui_2945 0.84 +0.1 3,152,408 + Dsui_2945 0.84 +0.3 3,152,408 + Dsui_2945 0.84 -0.3 3,152,437 - +0.8 3,152,658 + Dsui_2946 0.12 +0.7 3,152,712 + Dsui_2946 0.16 -0.2 3,152,712 + Dsui_2946 0.16 -0.8 3,152,730 - +0.8 3,152,767 + Dsui_2946 0.20 +0.5 3,152,778 + Dsui_2946 0.20 +0.1 3,152,810 - +0.8 3,152,961 + Dsui_2946 0.33 +0.8 3,152,965 + Dsui_2946 0.33 -0.1 3,152,993 - +0.8 3,153,070 + Dsui_2946 0.41 +0.8 3,153,308 - Dsui_2946 0.57 +0.8 3,153,308 - +0.8 3,153,308 - -0.2
Or see this region's nucleotide sequence