Experiment: ALP with Fusidic 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2770 and Dsui_2771 are separated by 103 nucleotides Dsui_2771 and Dsui_2772 are separated by 209 nucleotides Dsui_2772 and Dsui_2773 are separated by 338 nucleotides
Dsui_2770: Dsui_2770 - penicillin-binding protein 1C, at 2,932,961 to 2,935,231
_2770
Dsui_2771: Dsui_2771 - hypothetical protein, at 2,935,335 to 2,935,880
_2771
Dsui_2772: Dsui_2772 - uncharacterized protein, possibly involved in aromatic compounds catabolism, at 2,936,090 to 2,936,551
_2772
Dsui_2773: Dsui_2773 - putative enzyme involved in biosynthesis of extracellular polysaccharides, at 2,936,890 to 2,937,207
_2773
Position (kb)
2936
2937 Strain fitness (log2 ratio)
-2
-1
0
1 at 2935.199 kb on - strand at 2935.397 kb on + strand at 2935.397 kb on + strand at 2935.405 kb on - strand, within Dsui_2771 at 2935.405 kb on - strand, within Dsui_2771 at 2935.425 kb on - strand, within Dsui_2771 at 2935.467 kb on - strand, within Dsui_2771 at 2935.472 kb on - strand, within Dsui_2771 at 2935.472 kb on - strand, within Dsui_2771 at 2935.485 kb on - strand, within Dsui_2771 at 2935.522 kb on - strand, within Dsui_2771 at 2935.534 kb on - strand, within Dsui_2771 at 2935.564 kb on + strand at 2935.572 kb on - strand, within Dsui_2771 at 2935.572 kb on - strand, within Dsui_2771 at 2935.701 kb on + strand at 2935.855 kb on - strand at 2936.106 kb on - strand at 2936.230 kb on - strand, within Dsui_2772 at 2936.241 kb on - strand, within Dsui_2772 at 2936.440 kb on - strand, within Dsui_2772 at 2936.501 kb on - strand, within Dsui_2772 at 2936.662 kb on - strand at 2937.104 kb on - strand at 2937.108 kb on + strand, within Dsui_2773 at 2937.120 kb on + strand, within Dsui_2773 at 2937.135 kb on - strand, within Dsui_2773 at 2937.346 kb on + strand at 2937.441 kb on + strand at 2937.468 kb on + strand at 2937.528 kb on - strand at 2937.548 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Fusidic 0.02 mg/ml remove 2,935,199 - -1.1 2,935,397 + -0.1 2,935,397 + -0.1 2,935,405 - Dsui_2771 0.13 +1.1 2,935,405 - Dsui_2771 0.13 +1.0 2,935,425 - Dsui_2771 0.16 +0.6 2,935,467 - Dsui_2771 0.24 +0.8 2,935,472 - Dsui_2771 0.25 +0.8 2,935,472 - Dsui_2771 0.25 +0.7 2,935,485 - Dsui_2771 0.27 +0.5 2,935,522 - Dsui_2771 0.34 +0.6 2,935,534 - Dsui_2771 0.36 +0.6 2,935,564 + +0.9 2,935,572 - Dsui_2771 0.43 +0.7 2,935,572 - Dsui_2771 0.43 +1.2 2,935,701 + +0.9 2,935,855 - +0.8 2,936,106 - -0.7 2,936,230 - Dsui_2772 0.30 -2.1 2,936,241 - Dsui_2772 0.33 +1.5 2,936,440 - Dsui_2772 0.76 -1.1 2,936,501 - Dsui_2772 0.89 -1.9 2,936,662 - -0.1 2,937,104 - -0.1 2,937,108 + Dsui_2773 0.69 +0.7 2,937,120 + Dsui_2773 0.72 +0.8 2,937,135 - Dsui_2773 0.77 -1.4 2,937,346 + +0.4 2,937,441 + +0.3 2,937,468 + +0.2 2,937,528 - -1.1 2,937,548 - -0.7
Or see this region's nucleotide sequence