Experiment: ALP with Fusidic 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2732 and Dsui_2733 are separated by 56 nucleotides Dsui_2733 and Dsui_2734 are separated by 137 nucleotides Dsui_2734 and Dsui_2735 are separated by 576 nucleotides
Dsui_2732: Dsui_2732 - putative hydrolase or acyltransferase of alpha/beta superfamily, at 2,887,207 to 2,888,073
_2732
Dsui_2733: Dsui_2733 - bacterioferritin, at 2,888,130 to 2,888,603
_2733
Dsui_2734: Dsui_2734 - bacterioferritin-associated ferredoxin, at 2,888,741 to 2,888,947
_2734
Dsui_2735: Dsui_2735 - glycine cleavage system T protein, at 2,889,524 to 2,890,615
_2735
Position (kb)
2888
2889 Strain fitness (log2 ratio)
-1
0
1 at 2887.926 kb on - strand, within Dsui_2732 at 2888.030 kb on - strand at 2888.101 kb on + strand at 2888.314 kb on - strand, within Dsui_2733 at 2888.405 kb on - strand, within Dsui_2733 at 2888.444 kb on + strand, within Dsui_2733 at 2888.698 kb on - strand at 2888.815 kb on + strand, within Dsui_2734 at 2888.856 kb on - strand, within Dsui_2734 at 2888.856 kb on - strand, within Dsui_2734 at 2888.947 kb on - strand at 2888.964 kb on - strand at 2888.964 kb on - strand at 2889.161 kb on + strand at 2889.228 kb on + strand at 2889.310 kb on + strand at 2889.312 kb on + strand at 2889.377 kb on + strand at 2889.377 kb on + strand at 2889.408 kb on + strand at 2889.421 kb on + strand at 2889.422 kb on - strand at 2889.563 kb on + strand at 2889.702 kb on - strand at 2889.775 kb on + strand, within Dsui_2735 at 2889.788 kb on - strand at 2889.849 kb on + strand, within Dsui_2735 at 2889.889 kb on + strand, within Dsui_2735
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Fusidic 0.02 mg/ml remove 2,887,926 - Dsui_2732 0.83 -1.1 2,888,030 - +0.9 2,888,101 + -1.1 2,888,314 - Dsui_2733 0.39 -0.0 2,888,405 - Dsui_2733 0.58 +0.5 2,888,444 + Dsui_2733 0.66 -0.7 2,888,698 - +0.7 2,888,815 + Dsui_2734 0.36 -0.1 2,888,856 - Dsui_2734 0.56 +0.5 2,888,856 - Dsui_2734 0.56 +0.7 2,888,947 - -0.6 2,888,964 - +0.7 2,888,964 - -1.0 2,889,161 + +0.9 2,889,228 + +0.1 2,889,310 + -0.2 2,889,312 + -0.0 2,889,377 + -0.2 2,889,377 + -0.0 2,889,408 + -0.3 2,889,421 + -0.2 2,889,422 - +0.9 2,889,563 + +0.9 2,889,702 - -0.1 2,889,775 + Dsui_2735 0.23 -0.4 2,889,788 - +0.9 2,889,849 + Dsui_2735 0.30 +0.4 2,889,889 + Dsui_2735 0.33 -0.5
Or see this region's nucleotide sequence