Experiment: ALP with Fusidic 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2535 and Dsui_2536 overlap by 66 nucleotides Dsui_2536 and Dsui_2537 are separated by 205 nucleotides Dsui_2537 and Dsui_2538 are separated by 108 nucleotides
Dsui_2535: Dsui_2535 - putative divalent heavy-metal cations transporter, at 2,687,001 to 2,687,774
_2535
Dsui_2536: Dsui_2536 - hypothetical protein, at 2,687,709 to 2,688,020
_2536
Dsui_2537: Dsui_2537 - poly(R)-hydroxyalkanoic acid synthase, class I, at 2,688,226 to 2,689,965
_2537
Dsui_2538: Dsui_2538 - acetoacetyl-CoA reductase, at 2,690,074 to 2,690,814
_2538
Position (kb)
2688
2689
2690 Strain fitness (log2 ratio)
-1
0
1 at 2687.386 kb on - strand, within Dsui_2535 at 2687.518 kb on - strand at 2687.569 kb on + strand, within Dsui_2535 at 2687.689 kb on + strand, within Dsui_2535 at 2687.695 kb on + strand, within Dsui_2535 at 2687.768 kb on + strand at 2687.776 kb on - strand, within Dsui_2536 at 2687.860 kb on - strand, within Dsui_2536 at 2687.860 kb on - strand, within Dsui_2536 at 2687.896 kb on - strand, within Dsui_2536 at 2687.929 kb on + strand, within Dsui_2536 at 2688.204 kb on + strand at 2688.206 kb on + strand at 2688.214 kb on - strand at 2690.063 kb on - strand at 2690.134 kb on + strand at 2690.139 kb on + strand at 2690.281 kb on + strand, within Dsui_2538 at 2690.288 kb on - strand, within Dsui_2538 at 2690.288 kb on - strand at 2690.373 kb on + strand, within Dsui_2538 at 2690.380 kb on + strand, within Dsui_2538 at 2690.388 kb on - strand, within Dsui_2538 at 2690.388 kb on - strand, within Dsui_2538 at 2690.397 kb on + strand, within Dsui_2538 at 2690.508 kb on + strand, within Dsui_2538 at 2690.576 kb on - strand at 2690.640 kb on + strand, within Dsui_2538 at 2690.667 kb on + strand, within Dsui_2538 at 2690.675 kb on - strand, within Dsui_2538 at 2690.711 kb on + strand, within Dsui_2538 at 2690.737 kb on + strand, within Dsui_2538 at 2690.742 kb on - strand at 2690.747 kb on + strand at 2690.747 kb on + strand at 2690.811 kb on - strand at 2690.821 kb on + strand at 2690.964 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Fusidic 0.02 mg/ml remove 2,687,386 - Dsui_2535 0.50 -0.3 2,687,518 - +0.7 2,687,569 + Dsui_2535 0.73 +1.3 2,687,689 + Dsui_2535 0.89 +0.4 2,687,695 + Dsui_2535 0.90 +0.3 2,687,768 + -0.4 2,687,776 - Dsui_2536 0.21 -0.9 2,687,860 - Dsui_2536 0.48 +0.5 2,687,860 - Dsui_2536 0.48 -1.1 2,687,896 - Dsui_2536 0.60 +0.0 2,687,929 + Dsui_2536 0.71 -0.3 2,688,204 + +0.7 2,688,206 + -0.0 2,688,214 - -0.3 2,690,063 - +0.7 2,690,134 + +0.5 2,690,139 + -0.8 2,690,281 + Dsui_2538 0.28 -0.3 2,690,288 - Dsui_2538 0.29 +0.7 2,690,288 - -0.3 2,690,373 + Dsui_2538 0.40 -0.6 2,690,380 + Dsui_2538 0.41 -0.5 2,690,388 - Dsui_2538 0.42 -0.3 2,690,388 - Dsui_2538 0.42 +0.7 2,690,397 + Dsui_2538 0.44 -0.9 2,690,508 + Dsui_2538 0.59 -0.3 2,690,576 - +0.7 2,690,640 + Dsui_2538 0.76 -0.4 2,690,667 + Dsui_2538 0.80 +0.0 2,690,675 - Dsui_2538 0.81 -0.3 2,690,711 + Dsui_2538 0.86 -0.7 2,690,737 + Dsui_2538 0.89 -0.4 2,690,742 - -0.9 2,690,747 + -0.2 2,690,747 + -0.5 2,690,811 - +0.7 2,690,821 + -0.3 2,690,964 + +0.4
Or see this region's nucleotide sequence