Experiment: ALP with Fusidic 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2297 and Dsui_2298 are separated by 65 nucleotides Dsui_2298 and Dsui_2299 are separated by 114 nucleotides
Dsui_2297: Dsui_2297 - acetoacetyl-CoA synthase, at 2,450,906 to 2,452,876
_2297
Dsui_2298: Dsui_2298 - putative thioesterase, at 2,452,942 to 2,453,352
_2298
Dsui_2299: Dsui_2299 - flavin-dependent dehydrogenase, at 2,453,467 to 2,455,113
_2299
Position (kb)
2452
2453
2454 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2452.082 kb on + strand at 2452.196 kb on - strand, within Dsui_2297 at 2452.267 kb on - strand, within Dsui_2297 at 2452.274 kb on - strand, within Dsui_2297 at 2452.518 kb on + strand at 2452.687 kb on - strand at 2452.721 kb on - strand at 2452.905 kb on + strand at 2452.918 kb on - strand at 2452.929 kb on - strand at 2452.947 kb on - strand at 2453.167 kb on - strand, within Dsui_2298 at 2453.199 kb on + strand, within Dsui_2298 at 2453.207 kb on + strand at 2453.212 kb on + strand, within Dsui_2298 at 2453.215 kb on - strand, within Dsui_2298 at 2453.244 kb on + strand, within Dsui_2298 at 2453.265 kb on - strand, within Dsui_2298 at 2453.272 kb on + strand, within Dsui_2298 at 2453.275 kb on - strand, within Dsui_2298 at 2453.368 kb on + strand at 2453.368 kb on + strand at 2453.368 kb on + strand at 2453.376 kb on - strand at 2453.376 kb on - strand at 2453.645 kb on - strand at 2453.650 kb on + strand, within Dsui_2299 at 2453.653 kb on - strand, within Dsui_2299 at 2453.828 kb on - strand at 2454.004 kb on + strand, within Dsui_2299 at 2454.013 kb on - strand at 2454.037 kb on + strand, within Dsui_2299 at 2454.090 kb on + strand, within Dsui_2299 at 2454.093 kb on + strand, within Dsui_2299 at 2454.093 kb on + strand, within Dsui_2299 at 2454.162 kb on + strand, within Dsui_2299 at 2454.167 kb on + strand, within Dsui_2299 at 2454.205 kb on + strand, within Dsui_2299 at 2454.223 kb on - strand, within Dsui_2299
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Fusidic 0.02 mg/ml remove 2,452,082 + +0.8 2,452,196 - Dsui_2297 0.65 -0.5 2,452,267 - Dsui_2297 0.69 +0.8 2,452,274 - Dsui_2297 0.69 +0.8 2,452,518 + +0.8 2,452,687 - +0.8 2,452,721 - -1.8 2,452,905 + +0.8 2,452,918 - -0.2 2,452,929 - -0.2 2,452,947 - -0.2 2,453,167 - Dsui_2298 0.55 +0.8 2,453,199 + Dsui_2298 0.63 -0.2 2,453,207 + -0.2 2,453,212 + Dsui_2298 0.66 -0.2 2,453,215 - Dsui_2298 0.66 +0.8 2,453,244 + Dsui_2298 0.73 +1.8 2,453,265 - Dsui_2298 0.79 -0.8 2,453,272 + Dsui_2298 0.80 +0.8 2,453,275 - Dsui_2298 0.81 -1.2 2,453,368 + +0.8 2,453,368 + +0.8 2,453,368 + +0.8 2,453,376 - +0.8 2,453,376 - -1.5 2,453,645 - -1.2 2,453,650 + Dsui_2299 0.11 +1.2 2,453,653 - Dsui_2299 0.11 -0.2 2,453,828 - +0.8 2,454,004 + Dsui_2299 0.33 +2.0 2,454,013 - +0.8 2,454,037 + Dsui_2299 0.35 +0.7 2,454,090 + Dsui_2299 0.38 +0.7 2,454,093 + Dsui_2299 0.38 +1.4 2,454,093 + Dsui_2299 0.38 +1.9 2,454,162 + Dsui_2299 0.42 +0.7 2,454,167 + Dsui_2299 0.43 +1.8 2,454,205 + Dsui_2299 0.45 +1.3 2,454,223 - Dsui_2299 0.46 -0.2
Or see this region's nucleotide sequence