Strain Fitness in Dechlorosoma suillum PS around Dsui_2209
Experiment: ALP with Fusidic 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | ALP with Fusidic 0.02 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,347,408 | - | Dsui_2208 | 0.31 | +0.6 | |
2,347,454 | - | Dsui_2208 | 0.35 | +0.7 | |
2,347,510 | + | Dsui_2208 | 0.41 | -0.0 | |
2,347,611 | - | Dsui_2208 | 0.51 | +0.1 | |
2,347,703 | - | Dsui_2208 | 0.60 | -0.1 | |
2,347,744 | + | Dsui_2208 | 0.64 | -0.0 | |
2,347,754 | + | Dsui_2208 | 0.65 | -1.0 | |
2,347,885 | - | Dsui_2208 | 0.78 | +0.6 | |
2,347,984 | - | Dsui_2208 | 0.88 | +0.0 | |
2,347,989 | - | Dsui_2208 | 0.88 | +0.4 | |
2,348,044 | - | +0.1 | |||
2,348,091 | + | +1.0 | |||
2,348,103 | + | -0.0 | |||
2,349,289 | - | -0.0 | |||
2,349,338 | + | +1.0 | |||
2,349,338 | + | +0.3 | |||
2,349,348 | + | +0.1 | |||
2,349,368 | + | -0.2 | |||
2,349,375 | + | -0.3 | |||
2,349,383 | + | +0.6 | |||
2,349,428 | + | Dsui_2210 | 0.10 | +0.4 | |
2,349,439 | + | Dsui_2210 | 0.12 | -0.1 | |
2,349,506 | + | Dsui_2210 | 0.21 | +0.5 | |
2,349,589 | + | Dsui_2210 | 0.32 | -0.7 | |
2,349,702 | + | Dsui_2210 | 0.47 | -0.3 | |
2,349,703 | + | Dsui_2210 | 0.47 | -0.6 | |
2,349,862 | + | Dsui_2210 | 0.69 | -1.4 | |
2,349,977 | + | Dsui_2210 | 0.84 | -0.5 | |
2,349,987 | + | Dsui_2210 | 0.86 | -1.6 | |
2,350,081 | + | -1.0 | |||
2,350,088 | + | +0.2 |
Or see this region's nucleotide sequence