Experiment: ALP with Fusidic 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2166 and Dsui_2167 are separated by 101 nucleotides Dsui_2167 and Dsui_2168 are separated by 61 nucleotides
Dsui_2166: Dsui_2166 - Fe2+-dicitrate sensor, membrane component, at 2,301,735 to 2,302,670
_2166
Dsui_2167: Dsui_2167 - TonB-dependent siderophore receptor, at 2,302,772 to 2,305,192
_2167
Dsui_2168: Dsui_2168 - putative hydrolase of alpha/beta superfamily, at 2,305,254 to 2,306,219
_2168
Position (kb)
2302
2303
2304
2305
2306 Strain fitness (log2 ratio)
-2
-1
0
1 at 2301.906 kb on + strand, within Dsui_2166 at 2301.931 kb on + strand, within Dsui_2166 at 2301.939 kb on - strand at 2301.939 kb on - strand at 2302.360 kb on + strand, within Dsui_2166 at 2302.431 kb on + strand at 2302.586 kb on + strand at 2302.622 kb on - strand at 2302.648 kb on + strand at 2302.666 kb on + strand at 2302.774 kb on + strand at 2302.782 kb on - strand at 2302.782 kb on - strand at 2302.832 kb on + strand at 2302.928 kb on + strand at 2303.099 kb on + strand, within Dsui_2167 at 2303.100 kb on + strand, within Dsui_2167 at 2303.264 kb on + strand, within Dsui_2167 at 2303.411 kb on + strand at 2303.418 kb on + strand at 2303.456 kb on + strand, within Dsui_2167 at 2303.499 kb on - strand at 2303.555 kb on + strand, within Dsui_2167 at 2303.602 kb on - strand at 2303.609 kb on + strand, within Dsui_2167 at 2303.646 kb on + strand, within Dsui_2167 at 2303.789 kb on + strand, within Dsui_2167 at 2303.944 kb on - strand at 2303.996 kb on + strand, within Dsui_2167 at 2304.154 kb on + strand at 2304.195 kb on + strand, within Dsui_2167 at 2304.195 kb on + strand at 2304.203 kb on - strand at 2304.203 kb on - strand at 2304.341 kb on - strand at 2304.358 kb on - strand at 2304.360 kb on - strand, within Dsui_2167 at 2304.384 kb on + strand, within Dsui_2167 at 2304.391 kb on - strand at 2304.515 kb on + strand at 2304.555 kb on - strand at 2304.555 kb on - strand at 2304.615 kb on - strand at 2304.685 kb on + strand at 2304.894 kb on + strand at 2304.900 kb on - strand at 2304.921 kb on + strand at 2304.923 kb on - strand at 2305.022 kb on - strand at 2305.107 kb on - strand at 2305.161 kb on + strand at 2305.191 kb on - strand at 2305.388 kb on + strand at 2305.596 kb on - strand at 2305.687 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Fusidic 0.02 mg/ml remove 2,301,906 + Dsui_2166 0.18 -1.9 2,301,931 + Dsui_2166 0.21 +1.1 2,301,939 - +1.1 2,301,939 - +0.1 2,302,360 + Dsui_2166 0.67 +1.3 2,302,431 + +1.1 2,302,586 + -2.5 2,302,622 - +0.1 2,302,648 + -2.1 2,302,666 + +1.1 2,302,774 + +1.1 2,302,782 - -0.0 2,302,782 - -0.5 2,302,832 + +0.1 2,302,928 + -1.5 2,303,099 + Dsui_2167 0.14 -0.5 2,303,100 + Dsui_2167 0.14 +1.1 2,303,264 + Dsui_2167 0.20 +0.1 2,303,411 + +1.1 2,303,418 + +1.1 2,303,456 + Dsui_2167 0.28 -0.5 2,303,499 - -0.5 2,303,555 + Dsui_2167 0.32 -0.9 2,303,602 - -0.9 2,303,609 + Dsui_2167 0.35 -0.5 2,303,646 + Dsui_2167 0.36 +0.1 2,303,789 + Dsui_2167 0.42 +0.1 2,303,944 - +1.1 2,303,996 + Dsui_2167 0.51 -0.9 2,304,154 + +0.1 2,304,195 + Dsui_2167 0.59 +1.1 2,304,195 + +1.1 2,304,203 - +1.1 2,304,203 - +1.1 2,304,341 - +0.1 2,304,358 - +1.1 2,304,360 - Dsui_2167 0.66 +1.1 2,304,384 + Dsui_2167 0.67 -0.5 2,304,391 - +1.1 2,304,515 + +0.1 2,304,555 - +1.1 2,304,555 - +1.1 2,304,615 - +0.1 2,304,685 + +1.1 2,304,894 + +1.1 2,304,900 - +0.1 2,304,921 + +0.1 2,304,923 - -0.9 2,305,022 - +0.1 2,305,107 - +1.1 2,305,161 + -1.9 2,305,191 - -0.9 2,305,388 + +0.1 2,305,596 - +0.1 2,305,687 - +1.1
Or see this region's nucleotide sequence