Strain Fitness in Dechlorosoma suillum PS around Dsui_2005
Experiment: ALP with Fusidic 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | ALP with Fusidic 0.02 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,113,196 | + | Dsui_2004 | 0.52 | +1.2 | |
2,113,417 | + | Dsui_2004 | 0.63 | +1.2 | |
2,113,483 | - | Dsui_2004 | 0.67 | +1.2 | |
2,113,509 | + | Dsui_2004 | 0.68 | +0.2 | |
2,113,556 | + | Dsui_2004 | 0.70 | +1.2 | |
2,113,812 | + | Dsui_2004 | 0.84 | -1.4 | |
2,113,870 | + | Dsui_2004 | 0.87 | -0.4 | |
2,114,029 | - | -0.4 | |||
2,114,246 | - | +1.2 | |||
2,114,262 | + | +1.2 | |||
2,114,443 | + | Dsui_2005 | 0.46 | -0.4 | |
2,114,455 | + | Dsui_2005 | 0.47 | +1.2 | |
2,114,536 | - | Dsui_2005 | 0.59 | -0.4 | |
2,114,584 | + | Dsui_2005 | 0.65 | -2.8 | |
2,114,594 | + | Dsui_2005 | 0.67 | +0.2 | |
2,114,613 | - | Dsui_2005 | 0.69 | +1.2 | |
2,114,613 | - | +1.2 | |||
2,114,698 | - | Dsui_2005 | 0.81 | +1.2 | |
2,114,892 | + | +1.2 | |||
2,114,934 | - | +0.2 | |||
2,114,942 | + | +1.2 | |||
2,115,081 | + | Dsui_2006 | 0.12 | +0.2 | |
2,115,146 | - | Dsui_2006 | 0.15 | -0.8 | |
2,115,164 | + | +0.2 | |||
2,115,549 | + | Dsui_2006 | 0.34 | +0.2 | |
2,115,577 | + | +1.2 | |||
2,115,680 | - | +0.2 |
Or see this region's nucleotide sequence