Strain Fitness in Dechlorosoma suillum PS around Dsui_1982
Experiment: ALP with Fusidic 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | ALP with Fusidic 0.02 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,090,446 | + | Dsui_1981 | 0.44 | +1.5 | |
2,090,472 | - | Dsui_1981 | 0.46 | +1.2 | |
2,090,543 | + | Dsui_1981 | 0.52 | +0.4 | |
2,090,543 | + | Dsui_1981 | 0.52 | +0.3 | |
2,090,551 | - | Dsui_1981 | 0.52 | -1.1 | |
2,090,564 | - | Dsui_1981 | 0.53 | +0.2 | |
2,090,564 | - | Dsui_1981 | 0.53 | -0.4 | |
2,090,587 | + | Dsui_1981 | 0.55 | +0.8 | |
2,090,587 | + | Dsui_1981 | 0.55 | +1.0 | |
2,090,587 | + | Dsui_1981 | 0.55 | +0.4 | |
2,090,595 | - | Dsui_1981 | 0.56 | +1.2 | |
2,090,595 | - | Dsui_1981 | 0.56 | +0.2 | |
2,090,595 | - | Dsui_1981 | 0.56 | +1.2 | |
2,090,596 | + | Dsui_1981 | 0.56 | +0.7 | |
2,090,597 | + | Dsui_1981 | 0.56 | +0.3 | |
2,090,706 | - | Dsui_1981 | 0.64 | +0.2 | |
2,090,739 | - | Dsui_1981 | 0.67 | +1.2 | |
2,090,758 | + | Dsui_1981 | 0.68 | +1.9 | |
2,090,822 | + | Dsui_1981 | 0.73 | +0.2 | |
2,090,900 | - | Dsui_1981 | 0.79 | +0.2 | |
2,090,989 | - | +1.2 | |||
2,091,002 | - | Dsui_1981 | 0.87 | -0.4 | |
2,091,007 | - | Dsui_1981 | 0.88 | +1.2 | |
2,091,058 | + | +0.1 | |||
2,091,061 | - | -1.4 | |||
2,091,066 | - | -1.1 | |||
2,091,119 | + | +0.5 | |||
2,091,135 | - | -0.4 | |||
2,091,142 | + | +0.2 | |||
2,091,150 | - | +0.2 | |||
2,091,228 | + | +1.2 | |||
2,091,241 | + | +1.2 | |||
2,091,339 | - | +0.1 | |||
2,091,347 | - | +0.3 |
Or see this region's nucleotide sequence