Experiment: ALP with Fusidic 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1975 and Dsui_1976 are separated by 152 nucleotides Dsui_1976 and Dsui_1977 are separated by 109 nucleotides
Dsui_1975: Dsui_1975 - MoxR-like ATPase, at 2,083,848 to 2,084,789
_1975
Dsui_1976: Dsui_1976 - deacetylase, histone deacetylase/acetoin utilization protein, at 2,084,942 to 2,085,868
_1976
Dsui_1977: Dsui_1977 - dihydrodipicolinate synthase, at 2,085,978 to 2,086,856
_1977
Position (kb)
2084
2085
2086 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2083.962 kb on - strand, within Dsui_1975 at 2083.971 kb on - strand at 2084.007 kb on - strand, within Dsui_1975 at 2084.032 kb on - strand, within Dsui_1975 at 2084.042 kb on + strand, within Dsui_1975 at 2084.104 kb on - strand, within Dsui_1975 at 2084.159 kb on + strand, within Dsui_1975 at 2084.225 kb on + strand, within Dsui_1975 at 2084.253 kb on + strand, within Dsui_1975 at 2084.293 kb on - strand, within Dsui_1975 at 2084.293 kb on - strand at 2084.300 kb on + strand, within Dsui_1975 at 2084.335 kb on - strand, within Dsui_1975 at 2084.407 kb on + strand, within Dsui_1975 at 2084.415 kb on - strand, within Dsui_1975 at 2084.475 kb on - strand at 2084.476 kb on - strand, within Dsui_1975 at 2084.485 kb on - strand, within Dsui_1975 at 2084.562 kb on + strand, within Dsui_1975 at 2084.608 kb on - strand, within Dsui_1975 at 2084.613 kb on + strand, within Dsui_1975 at 2084.687 kb on - strand, within Dsui_1975 at 2084.687 kb on - strand, within Dsui_1975 at 2084.692 kb on - strand, within Dsui_1975 at 2084.785 kb on + strand at 2084.792 kb on - strand at 2084.836 kb on + strand at 2084.864 kb on + strand at 2084.887 kb on + strand at 2084.887 kb on - strand at 2084.900 kb on - strand at 2085.048 kb on + strand, within Dsui_1976 at 2085.099 kb on + strand, within Dsui_1976 at 2085.099 kb on + strand, within Dsui_1976 at 2085.099 kb on + strand, within Dsui_1976 at 2085.135 kb on + strand, within Dsui_1976 at 2085.143 kb on - strand at 2085.221 kb on - strand at 2085.262 kb on - strand at 2085.344 kb on + strand, within Dsui_1976 at 2085.344 kb on + strand, within Dsui_1976 at 2085.474 kb on + strand, within Dsui_1976 at 2085.485 kb on + strand, within Dsui_1976 at 2085.495 kb on + strand, within Dsui_1976 at 2085.542 kb on + strand, within Dsui_1976 at 2085.637 kb on + strand, within Dsui_1976 at 2085.645 kb on - strand, within Dsui_1976 at 2085.692 kb on + strand, within Dsui_1976 at 2085.702 kb on + strand, within Dsui_1976 at 2085.774 kb on - strand, within Dsui_1976 at 2085.816 kb on + strand at 2085.822 kb on - strand at 2085.822 kb on - strand at 2085.822 kb on - strand at 2085.824 kb on - strand at 2085.858 kb on - strand at 2085.872 kb on - strand at 2085.890 kb on + strand at 2085.890 kb on + strand at 2085.895 kb on + strand at 2085.898 kb on - strand at 2085.898 kb on - strand at 2085.910 kb on + strand at 2085.910 kb on + strand at 2085.910 kb on + strand at 2085.910 kb on + strand at 2085.918 kb on + strand at 2085.918 kb on + strand at 2085.918 kb on + strand at 2085.918 kb on + strand at 2085.918 kb on + strand at 2085.918 kb on - strand at 2085.931 kb on - strand at 2085.938 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Fusidic 0.02 mg/ml remove 2,083,962 - Dsui_1975 0.12 +0.6 2,083,971 - +1.2 2,084,007 - Dsui_1975 0.17 -0.4 2,084,032 - Dsui_1975 0.20 +0.2 2,084,042 + Dsui_1975 0.21 -0.8 2,084,104 - Dsui_1975 0.27 +1.2 2,084,159 + Dsui_1975 0.33 -2.2 2,084,225 + Dsui_1975 0.40 -0.4 2,084,253 + Dsui_1975 0.43 +1.2 2,084,293 - Dsui_1975 0.47 -2.2 2,084,293 - +1.2 2,084,300 + Dsui_1975 0.48 -0.4 2,084,335 - Dsui_1975 0.52 +2.2 2,084,407 + Dsui_1975 0.59 +1.2 2,084,415 - Dsui_1975 0.60 -0.4 2,084,475 - +1.2 2,084,476 - Dsui_1975 0.67 -0.4 2,084,485 - Dsui_1975 0.68 +1.2 2,084,562 + Dsui_1975 0.76 -0.8 2,084,608 - Dsui_1975 0.81 -1.1 2,084,613 + Dsui_1975 0.81 +1.2 2,084,687 - Dsui_1975 0.89 +0.6 2,084,687 - Dsui_1975 0.89 +2.4 2,084,692 - Dsui_1975 0.90 -0.4 2,084,785 + +0.2 2,084,792 - +2.2 2,084,836 + +0.4 2,084,864 + +1.5 2,084,887 + +0.0 2,084,887 - +0.2 2,084,900 - +1.2 2,085,048 + Dsui_1976 0.11 +1.4 2,085,099 + Dsui_1976 0.17 +1.6 2,085,099 + Dsui_1976 0.17 +1.3 2,085,099 + Dsui_1976 0.17 +1.6 2,085,135 + Dsui_1976 0.21 +1.5 2,085,143 - +1.2 2,085,221 - +1.2 2,085,262 - -0.4 2,085,344 + Dsui_1976 0.43 +1.1 2,085,344 + Dsui_1976 0.43 +1.1 2,085,474 + Dsui_1976 0.57 +1.4 2,085,485 + Dsui_1976 0.59 +1.7 2,085,495 + Dsui_1976 0.60 +1.7 2,085,542 + Dsui_1976 0.65 +1.5 2,085,637 + Dsui_1976 0.75 +1.7 2,085,645 - Dsui_1976 0.76 -1.9 2,085,692 + Dsui_1976 0.81 +1.7 2,085,702 + Dsui_1976 0.82 +1.1 2,085,774 - Dsui_1976 0.90 +1.2 2,085,816 + +1.0 2,085,822 - +0.2 2,085,822 - +0.2 2,085,822 - +0.2 2,085,824 - -2.4 2,085,858 - -1.4 2,085,872 - +0.2 2,085,890 + +0.6 2,085,890 + +2.5 2,085,895 + +0.2 2,085,898 - +0.2 2,085,898 - -0.4 2,085,910 + +0.4 2,085,910 + +0.6 2,085,910 + -0.5 2,085,910 + +0.7 2,085,918 + +1.5 2,085,918 + +0.4 2,085,918 + -0.3 2,085,918 + -3.5 2,085,918 + -0.8 2,085,918 - +1.2 2,085,931 - +1.2 2,085,938 + +0.6
Or see this region's nucleotide sequence