Experiment: ALP with Fusidic 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1753 and Dsui_1754 are separated by 15 nucleotides Dsui_1754 and Dsui_1755 are separated by 24 nucleotides
Dsui_1753: Dsui_1753 - flagellar protein export ATPase FliI, at 1,839,183 to 1,840,598
_1753
Dsui_1754: Dsui_1754 - flagellar biosynthesis/type III secretory pathway protein, at 1,840,614 to 1,841,297
_1754
Dsui_1755: Dsui_1755 - flagellar motor switch protein FliG, at 1,841,322 to 1,842,323
_1755
Position (kb)
1840
1841
1842 Strain fitness (log2 ratio)
-2
-1
0
1 at 1839.760 kb on + strand, within Dsui_1753 at 1839.938 kb on - strand, within Dsui_1753 at 1839.973 kb on + strand, within Dsui_1753 at 1840.026 kb on + strand, within Dsui_1753 at 1840.178 kb on - strand, within Dsui_1753 at 1840.211 kb on + strand, within Dsui_1753 at 1840.232 kb on + strand at 1840.324 kb on + strand, within Dsui_1753 at 1840.480 kb on + strand at 1840.520 kb on + strand at 1840.525 kb on - strand at 1840.582 kb on - strand at 1840.598 kb on + strand at 1840.601 kb on - strand at 1840.601 kb on - strand at 1840.601 kb on - strand at 1840.862 kb on + strand, within Dsui_1754 at 1840.870 kb on - strand, within Dsui_1754 at 1841.006 kb on + strand at 1841.029 kb on + strand, within Dsui_1754 at 1841.089 kb on + strand, within Dsui_1754 at 1841.095 kb on + strand, within Dsui_1754 at 1841.139 kb on - strand, within Dsui_1754 at 1841.169 kb on - strand, within Dsui_1754 at 1841.227 kb on - strand, within Dsui_1754 at 1841.243 kb on + strand at 1841.333 kb on - strand at 1841.389 kb on + strand at 1841.439 kb on + strand, within Dsui_1755 at 1841.446 kb on + strand, within Dsui_1755 at 1841.454 kb on - strand, within Dsui_1755 at 1841.454 kb on - strand, within Dsui_1755 at 1841.548 kb on - strand, within Dsui_1755 at 1841.645 kb on - strand, within Dsui_1755 at 1841.647 kb on - strand, within Dsui_1755 at 1841.727 kb on + strand, within Dsui_1755 at 1841.828 kb on + strand, within Dsui_1755 at 1841.860 kb on + strand, within Dsui_1755 at 1841.916 kb on - strand, within Dsui_1755 at 1842.089 kb on + strand, within Dsui_1755 at 1842.149 kb on + strand, within Dsui_1755 at 1842.174 kb on - strand, within Dsui_1755 at 1842.204 kb on - strand, within Dsui_1755 at 1842.221 kb on + strand, within Dsui_1755 at 1842.224 kb on + strand at 1842.291 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Fusidic 0.02 mg/ml remove 1,839,760 + Dsui_1753 0.41 -1.4 1,839,938 - Dsui_1753 0.53 -0.5 1,839,973 + Dsui_1753 0.56 +0.6 1,840,026 + Dsui_1753 0.60 -1.4 1,840,178 - Dsui_1753 0.70 +0.3 1,840,211 + Dsui_1753 0.73 +0.6 1,840,232 + +0.6 1,840,324 + Dsui_1753 0.81 -1.0 1,840,480 + -2.4 1,840,520 + -0.9 1,840,525 - -0.8 1,840,582 - -0.1 1,840,598 + -0.4 1,840,601 - -0.2 1,840,601 - -0.1 1,840,601 - +0.4 1,840,862 + Dsui_1754 0.36 +0.6 1,840,870 - Dsui_1754 0.37 +0.5 1,841,006 + +0.6 1,841,029 + Dsui_1754 0.61 -0.9 1,841,089 + Dsui_1754 0.69 -0.4 1,841,095 + Dsui_1754 0.70 -0.9 1,841,139 - Dsui_1754 0.77 +0.2 1,841,169 - Dsui_1754 0.81 +0.4 1,841,227 - Dsui_1754 0.90 +0.4 1,841,243 + -0.4 1,841,333 - -0.6 1,841,389 + -2.5 1,841,439 + Dsui_1755 0.12 -0.9 1,841,446 + Dsui_1755 0.12 -0.9 1,841,454 - Dsui_1755 0.13 +0.3 1,841,454 - Dsui_1755 0.13 -0.1 1,841,548 - Dsui_1755 0.23 -0.2 1,841,645 - Dsui_1755 0.32 -0.2 1,841,647 - Dsui_1755 0.32 -0.9 1,841,727 + Dsui_1755 0.40 +0.6 1,841,828 + Dsui_1755 0.50 -1.7 1,841,860 + Dsui_1755 0.54 -0.4 1,841,916 - Dsui_1755 0.59 -0.3 1,842,089 + Dsui_1755 0.77 +0.6 1,842,149 + Dsui_1755 0.83 -0.9 1,842,174 - Dsui_1755 0.85 -0.1 1,842,204 - Dsui_1755 0.88 +0.6 1,842,221 + Dsui_1755 0.90 -0.9 1,842,224 + +0.6 1,842,291 + -0.4
Or see this region's nucleotide sequence