Strain Fitness in Dechlorosoma suillum PS around Dsui_1505
Experiment: ALP with Fusidic 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | ALP with Fusidic 0.02 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 1,569,371 | + | Dsui_1504 | 0.17 | +0.2 | |
| 1,569,371 | + | Dsui_1504 | 0.17 | +0.1 | |
| 1,569,371 | + | Dsui_1504 | 0.17 | -0.2 | |
| 1,569,379 | - | Dsui_1504 | 0.18 | -2.3 | |
| 1,569,413 | - | Dsui_1504 | 0.21 | +0.5 | |
| 1,569,554 | + | Dsui_1504 | 0.33 | -1.8 | |
| 1,569,587 | - | Dsui_1504 | 0.36 | -1.0 | |
| 1,569,594 | + | Dsui_1504 | 0.36 | -0.2 | |
| 1,569,602 | - | Dsui_1504 | 0.37 | -0.5 | |
| 1,569,723 | + | Dsui_1504 | 0.48 | -0.3 | |
| 1,569,725 | + | Dsui_1504 | 0.48 | -0.3 | |
| 1,569,862 | + | Dsui_1504 | 0.60 | +1.3 | |
| 1,570,030 | - | Dsui_1504 | 0.74 | +0.5 | |
| 1,570,075 | - | Dsui_1504 | 0.78 | -1.0 | |
| 1,570,245 | + | -1.0 | |||
| 1,570,580 | - | Dsui_1505 | 0.51 | -1.8 | |
| 1,570,733 | + | Dsui_1505 | 0.83 | +0.5 | |
| 1,570,890 | + | -2.0 | |||
| 1,570,968 | - | -1.5 | |||
| 1,571,009 | - | -1.8 | |||
| 1,571,009 | - | -0.5 | |||
| 1,571,009 | - | -0.5 | |||
| 1,571,009 | - | +0.5 |
Or see this region's nucleotide sequence