Experiment: ALP with Fusidic 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1493 and Dsui_1494 are separated by 27 nucleotides Dsui_1494 and Dsui_1495 are separated by 78 nucleotides Dsui_1495 and Dsui_1496 are separated by 22 nucleotides
Dsui_1493: Dsui_1493 - phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase, at 1,556,447 to 1,557,877
_1493
Dsui_1494: Dsui_1494 - ATP-dependent metalloprotease FtsH, at 1,557,905 to 1,559,734
_1494
Dsui_1495: Dsui_1495 - molecular chaperone (small heat shock protein), at 1,559,813 to 1,560,271
_1495
Dsui_1496: Dsui_1496 - YfdX protein, at 1,560,294 to 1,561,208
_1496
Position (kb)
1557
1558
1559
1560 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1556.977 kb on - strand, within Dsui_1493 at 1557.229 kb on + strand, within Dsui_1493 at 1557.233 kb on + strand, within Dsui_1493 at 1557.438 kb on - strand, within Dsui_1493 at 1557.553 kb on - strand, within Dsui_1493 at 1557.591 kb on + strand, within Dsui_1493 at 1557.617 kb on - strand, within Dsui_1493 at 1557.678 kb on + strand, within Dsui_1493 at 1557.678 kb on + strand, within Dsui_1493 at 1557.717 kb on + strand, within Dsui_1493 at 1557.717 kb on + strand, within Dsui_1493 at 1557.725 kb on + strand at 1557.727 kb on + strand, within Dsui_1493 at 1557.733 kb on - strand, within Dsui_1493 at 1557.733 kb on - strand, within Dsui_1493 at 1557.733 kb on - strand, within Dsui_1493 at 1557.735 kb on - strand at 1558.223 kb on - strand, within Dsui_1494 at 1558.225 kb on + strand, within Dsui_1494 at 1558.227 kb on + strand, within Dsui_1494 at 1558.340 kb on - strand, within Dsui_1494 at 1558.361 kb on + strand, within Dsui_1494 at 1558.404 kb on - strand, within Dsui_1494 at 1558.571 kb on + strand, within Dsui_1494 at 1558.911 kb on + strand, within Dsui_1494 at 1558.919 kb on - strand, within Dsui_1494 at 1558.956 kb on + strand, within Dsui_1494 at 1559.002 kb on - strand, within Dsui_1494 at 1559.171 kb on + strand, within Dsui_1494 at 1559.179 kb on - strand, within Dsui_1494 at 1559.262 kb on - strand, within Dsui_1494 at 1559.262 kb on - strand, within Dsui_1494 at 1559.264 kb on + strand, within Dsui_1494 at 1559.543 kb on + strand, within Dsui_1494 at 1559.743 kb on + strand at 1559.748 kb on + strand at 1559.769 kb on - strand at 1559.994 kb on + strand, within Dsui_1495 at 1560.170 kb on - strand, within Dsui_1495 at 1560.220 kb on + strand, within Dsui_1495 at 1560.228 kb on - strand at 1560.228 kb on - strand at 1560.292 kb on - strand at 1560.306 kb on - strand at 1560.308 kb on + strand at 1560.326 kb on - strand at 1560.366 kb on + strand at 1560.366 kb on + strand at 1560.374 kb on - strand at 1560.374 kb on - strand at 1560.374 kb on - strand at 1560.420 kb on - strand, within Dsui_1496 at 1560.557 kb on + strand, within Dsui_1496 at 1560.657 kb on - strand, within Dsui_1496 at 1560.657 kb on - strand, within Dsui_1496 at 1560.691 kb on - strand, within Dsui_1496 at 1560.728 kb on + strand, within Dsui_1496
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Fusidic 0.02 mg/ml remove 1,556,977 - Dsui_1493 0.37 -0.5 1,557,229 + Dsui_1493 0.55 -1.1 1,557,233 + Dsui_1493 0.55 -0.2 1,557,438 - Dsui_1493 0.69 -1.5 1,557,553 - Dsui_1493 0.77 -1.1 1,557,591 + Dsui_1493 0.80 -1.1 1,557,617 - Dsui_1493 0.82 +0.5 1,557,678 + Dsui_1493 0.86 -0.5 1,557,678 + Dsui_1493 0.86 +0.5 1,557,717 + Dsui_1493 0.89 +0.5 1,557,717 + Dsui_1493 0.89 +0.5 1,557,725 + -0.5 1,557,727 + Dsui_1493 0.89 -1.8 1,557,733 - Dsui_1493 0.90 -1.8 1,557,733 - Dsui_1493 0.90 -0.5 1,557,733 - Dsui_1493 0.90 -1.8 1,557,735 - -0.5 1,558,223 - Dsui_1494 0.17 -0.5 1,558,225 + Dsui_1494 0.17 +0.5 1,558,227 + Dsui_1494 0.18 -1.8 1,558,340 - Dsui_1494 0.24 +0.5 1,558,361 + Dsui_1494 0.25 +0.5 1,558,404 - Dsui_1494 0.27 +0.5 1,558,571 + Dsui_1494 0.36 -0.5 1,558,911 + Dsui_1494 0.55 -0.8 1,558,919 - Dsui_1494 0.55 -0.5 1,558,956 + Dsui_1494 0.57 -3.3 1,559,002 - Dsui_1494 0.60 +0.5 1,559,171 + Dsui_1494 0.69 -0.5 1,559,179 - Dsui_1494 0.70 -1.1 1,559,262 - Dsui_1494 0.74 -1.1 1,559,262 - Dsui_1494 0.74 -0.5 1,559,264 + Dsui_1494 0.74 -1.1 1,559,543 + Dsui_1494 0.90 +1.4 1,559,743 + +0.5 1,559,748 + -1.5 1,559,769 - +0.5 1,559,994 + Dsui_1495 0.39 -0.5 1,560,170 - Dsui_1495 0.78 +0.5 1,560,220 + Dsui_1495 0.89 +1.5 1,560,228 - +0.5 1,560,228 - +0.5 1,560,292 - -1.1 1,560,306 - -0.5 1,560,308 + -0.5 1,560,326 - -1.5 1,560,366 + +0.5 1,560,366 + -1.1 1,560,374 - -0.5 1,560,374 - -0.1 1,560,374 - +0.5 1,560,420 - Dsui_1496 0.14 -0.5 1,560,557 + Dsui_1496 0.29 -0.5 1,560,657 - Dsui_1496 0.40 -0.5 1,560,657 - Dsui_1496 0.40 -0.5 1,560,691 - Dsui_1496 0.43 +0.5 1,560,728 + Dsui_1496 0.47 +1.5
Or see this region's nucleotide sequence