Strain Fitness in Dechlorosoma suillum PS around Dsui_1394
Experiment: ALP with Fusidic 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | ALP with Fusidic 0.02 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,451,639 | + | +0.5 | |||
1,451,639 | + | Dsui_1393 | 0.46 | +0.5 | |
1,451,639 | + | +0.5 | |||
1,451,647 | - | -0.5 | |||
1,451,656 | + | -0.5 | |||
1,451,668 | + | Dsui_1393 | 0.48 | -0.5 | |
1,451,668 | - | Dsui_1393 | 0.48 | +0.5 | |
1,451,932 | + | Dsui_1393 | 0.63 | -0.5 | |
1,452,105 | - | +0.5 | |||
1,452,112 | - | Dsui_1393 | 0.74 | +0.5 | |
1,452,278 | - | +0.5 | |||
1,452,462 | - | -0.5 | |||
1,452,661 | - | Dsui_1394 | 0.11 | +0.5 | |
1,452,784 | - | Dsui_1394 | 0.23 | -2.1 | |
1,452,797 | + | Dsui_1394 | 0.25 | -1.1 | |
1,452,830 | - | Dsui_1394 | 0.28 | -1.8 | |
1,452,892 | - | Dsui_1394 | 0.34 | -2.0 | |
1,453,053 | - | +0.5 | |||
1,453,103 | - | Dsui_1394 | 0.56 | -1.5 | |
1,453,431 | - | Dsui_1394 | 0.89 | -1.5 | |
1,453,468 | - | +0.5 | |||
1,453,789 | - | +0.5 | |||
1,453,791 | + | -0.5 | |||
1,454,147 | + | Dsui_1395 | 0.17 | -1.1 | |
1,454,148 | + | Dsui_1395 | 0.18 | -0.5 | |
1,454,205 | + | -1.1 | |||
1,454,206 | + | +0.5 | |||
1,454,253 | + | Dsui_1395 | 0.23 | -0.5 | |
1,454,282 | + | +0.5 | |||
1,454,352 | + | +0.5 | |||
1,454,402 | + | Dsui_1395 | 0.31 | -0.5 | |
1,454,456 | - | Dsui_1395 | 0.34 | +0.5 | |
1,454,467 | + | +0.5 | |||
1,454,467 | - | Dsui_1395 | 0.34 | -0.1 |
Or see this region's nucleotide sequence