Experiment: ALP with Fusidic 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1306 and Dsui_1307 are separated by 67 nucleotides Dsui_1307 and Dsui_1308 are separated by 32 nucleotides Dsui_1308 and Dsui_1309 overlap by 1 nucleotides Dsui_1309 and Dsui_1310 are separated by 97 nucleotides
Dsui_1306: Dsui_1306 - delta-aminolevulinic acid dehydratase, at 1,367,859 to 1,368,869
_1306
Dsui_1307: Dsui_1307 - transcriptional regulator, at 1,368,937 to 1,369,533
_1307
Dsui_1308: Dsui_1308 - pyrimidine 5''-nucleotidase, at 1,369,566 to 1,370,243
_1308
Dsui_1309: Dsui_1309 - acetylglutamate kinase, at 1,370,243 to 1,371,124
_1309
Dsui_1310: Dsui_1310 - molecular chaperone (small heat shock protein), at 1,371,222 to 1,371,653
_1310
Position (kb)
1369
1370
1371 Strain fitness (log2 ratio)
-2
-1
0
1 at 1368.954 kb on + strand at 1369.067 kb on - strand, within Dsui_1307 at 1369.209 kb on - strand, within Dsui_1307 at 1369.221 kb on + strand, within Dsui_1307 at 1369.248 kb on + strand, within Dsui_1307 at 1369.285 kb on - strand, within Dsui_1307 at 1369.372 kb on + strand, within Dsui_1307 at 1369.372 kb on + strand, within Dsui_1307 at 1369.380 kb on - strand, within Dsui_1307 at 1369.380 kb on - strand, within Dsui_1307 at 1369.418 kb on - strand, within Dsui_1307 at 1369.460 kb on + strand, within Dsui_1307 at 1369.468 kb on - strand, within Dsui_1307 at 1369.468 kb on - strand, within Dsui_1307 at 1369.529 kb on + strand at 1369.537 kb on + strand at 1369.547 kb on - strand at 1369.582 kb on + strand at 1369.590 kb on - strand at 1369.590 kb on - strand at 1369.616 kb on + strand at 1369.693 kb on + strand, within Dsui_1308 at 1369.716 kb on + strand, within Dsui_1308 at 1369.751 kb on - strand, within Dsui_1308 at 1369.875 kb on - strand, within Dsui_1308 at 1369.881 kb on - strand, within Dsui_1308 at 1369.881 kb on - strand, within Dsui_1308 at 1369.881 kb on - strand, within Dsui_1308 at 1370.180 kb on - strand at 1370.235 kb on - strand at 1371.192 kb on + strand at 1371.220 kb on + strand at 1371.222 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Fusidic 0.02 mg/ml remove 1,368,954 + -1.1 1,369,067 - Dsui_1307 0.22 +0.5 1,369,209 - Dsui_1307 0.46 +0.1 1,369,221 + Dsui_1307 0.48 +0.4 1,369,248 + Dsui_1307 0.52 +0.4 1,369,285 - Dsui_1307 0.58 -0.4 1,369,372 + Dsui_1307 0.73 +0.4 1,369,372 + Dsui_1307 0.73 -1.6 1,369,380 - Dsui_1307 0.74 -0.5 1,369,380 - Dsui_1307 0.74 -0.2 1,369,418 - Dsui_1307 0.81 +0.4 1,369,460 + Dsui_1307 0.88 +0.4 1,369,468 - Dsui_1307 0.89 +0.7 1,369,468 - Dsui_1307 0.89 -0.5 1,369,529 + +0.4 1,369,537 + +0.4 1,369,547 - -0.6 1,369,582 + -0.6 1,369,590 - -0.6 1,369,590 - -1.0 1,369,616 + -0.6 1,369,693 + Dsui_1308 0.19 -1.9 1,369,716 + Dsui_1308 0.22 +0.4 1,369,751 - Dsui_1308 0.27 -0.5 1,369,875 - Dsui_1308 0.46 -0.9 1,369,881 - Dsui_1308 0.46 -1.0 1,369,881 - Dsui_1308 0.46 +0.2 1,369,881 - Dsui_1308 0.46 +0.0 1,370,180 - -0.3 1,370,235 - -0.5 1,371,192 + +0.4 1,371,220 + +0.4 1,371,222 - -0.5
Or see this region's nucleotide sequence