Experiment: ALP with Fusidic 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0955 and Dsui_0956 are separated by 108 nucleotides Dsui_0956 and Dsui_0957 are separated by 132 nucleotides
Dsui_0955: Dsui_0955 - nitrogenase iron protein, at 980,747 to 981,622
_0955
Dsui_0956: Dsui_0956 - nitrogenase molybdenum-iron protein alpha chain, at 981,731 to 983,173
_0956
Dsui_0957: Dsui_0957 - nitrogenase molybdenum-iron protein beta chain, at 983,306 to 984,826
_0957
Position (kb) 981
982
983
984 Strain fitness (log2 ratio) -2
-1
0
1 at 980.838 kb on - strand at 980.917 kb on - strand, within Dsui_0955 at 981.100 kb on - strand at 981.249 kb on - strand, within Dsui_0955 at 981.249 kb on - strand, within Dsui_0955 at 981.303 kb on - strand at 981.368 kb on - strand, within Dsui_0955 at 981.455 kb on - strand, within Dsui_0955 at 981.466 kb on + strand, within Dsui_0955 at 981.496 kb on - strand, within Dsui_0955 at 981.501 kb on - strand at 981.604 kb on + strand at 981.735 kb on + strand at 981.774 kb on + strand at 981.782 kb on - strand at 981.836 kb on - strand at 981.836 kb on - strand at 981.879 kb on - strand, within Dsui_0956 at 981.965 kb on + strand, within Dsui_0956 at 982.216 kb on + strand, within Dsui_0956 at 982.351 kb on + strand, within Dsui_0956 at 982.599 kb on + strand, within Dsui_0956 at 982.613 kb on + strand, within Dsui_0956 at 982.623 kb on + strand, within Dsui_0956 at 982.896 kb on + strand, within Dsui_0956 at 982.904 kb on - strand, within Dsui_0956 at 983.099 kb on + strand at 983.159 kb on + strand at 983.177 kb on - strand at 983.205 kb on + strand at 983.231 kb on + strand at 983.239 kb on - strand at 983.273 kb on - strand at 983.530 kb on + strand, within Dsui_0957 at 983.555 kb on + strand, within Dsui_0957 at 983.574 kb on + strand, within Dsui_0957 at 983.596 kb on + strand, within Dsui_0957 at 983.740 kb on - strand, within Dsui_0957 at 983.815 kb on - strand, within Dsui_0957 at 983.846 kb on + strand, within Dsui_0957 at 983.902 kb on + strand, within Dsui_0957 at 984.026 kb on + strand, within Dsui_0957 at 984.044 kb on - strand, within Dsui_0957
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Fusidic 0.02 mg/ml remove 980,838 - +0.5 980,917 - Dsui_0955 0.19 -1.5 981,100 - +0.5 981,249 - Dsui_0955 0.57 -0.5 981,249 - Dsui_0955 0.57 -2.0 981,303 - +0.5 981,368 - Dsui_0955 0.71 -0.5 981,455 - Dsui_0955 0.81 -2.3 981,466 + Dsui_0955 0.82 +0.5 981,496 - Dsui_0955 0.86 +0.5 981,501 - +0.5 981,604 + -0.5 981,735 + +0.5 981,774 + -2.0 981,782 - +0.5 981,836 - +0.5 981,836 - +0.5 981,879 - Dsui_0956 0.10 -2.3 981,965 + Dsui_0956 0.16 +0.5 982,216 + Dsui_0956 0.34 +0.5 982,351 + Dsui_0956 0.43 +0.5 982,599 + Dsui_0956 0.60 +0.5 982,613 + Dsui_0956 0.61 +0.5 982,623 + Dsui_0956 0.62 +0.5 982,896 + Dsui_0956 0.81 -0.5 982,904 - Dsui_0956 0.81 +0.5 983,099 + -1.0 983,159 + +0.5 983,177 - -1.8 983,205 + +0.5 983,231 + +0.5 983,239 - -2.0 983,273 - +0.5 983,530 + Dsui_0957 0.15 -0.5 983,555 + Dsui_0957 0.16 +0.5 983,574 + Dsui_0957 0.18 +0.5 983,596 + Dsui_0957 0.19 -0.5 983,740 - Dsui_0957 0.29 +0.5 983,815 - Dsui_0957 0.33 +0.5 983,846 + Dsui_0957 0.36 -0.5 983,902 + Dsui_0957 0.39 +0.5 984,026 + Dsui_0957 0.47 +0.5 984,044 - Dsui_0957 0.49 +0.5
Or see this region's nucleotide sequence