Experiment: ALP with Fusidic 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0804 and Dsui_0805 are separated by 200 nucleotides Dsui_0805 and Dsui_0806 are separated by 651 nucleotides
Dsui_0804: Dsui_0804 - hypothetical protein, at 811,179 to 812,312
_0804
Dsui_0805: Dsui_0805 - primosomal protein N'', at 812,513 to 814,537
_0805
Dsui_0806: Dsui_0806 - uroporphyrinogen decarboxylase, at 815,189 to 816,271
_0806
Position (kb) 812
813
814
815 Strain fitness (log2 ratio) -2
-1
0
1
2 at 811.526 kb on + strand, within Dsui_0804 at 811.589 kb on + strand, within Dsui_0804 at 811.600 kb on + strand, within Dsui_0804 at 811.625 kb on + strand, within Dsui_0804 at 811.731 kb on + strand at 811.746 kb on - strand, within Dsui_0804 at 811.815 kb on + strand, within Dsui_0804 at 811.847 kb on + strand, within Dsui_0804 at 811.855 kb on - strand, within Dsui_0804 at 811.855 kb on - strand, within Dsui_0804 at 811.880 kb on + strand, within Dsui_0804 at 811.884 kb on + strand, within Dsui_0804 at 811.884 kb on + strand at 811.892 kb on - strand, within Dsui_0804 at 811.894 kb on - strand, within Dsui_0804 at 811.902 kb on - strand, within Dsui_0804 at 811.945 kb on + strand, within Dsui_0804 at 811.953 kb on - strand, within Dsui_0804 at 811.955 kb on + strand, within Dsui_0804 at 811.963 kb on - strand, within Dsui_0804 at 811.970 kb on + strand, within Dsui_0804 at 811.970 kb on + strand, within Dsui_0804 at 811.978 kb on - strand, within Dsui_0804 at 812.012 kb on - strand, within Dsui_0804 at 812.063 kb on + strand, within Dsui_0804 at 812.063 kb on + strand, within Dsui_0804 at 812.153 kb on + strand, within Dsui_0804 at 812.232 kb on - strand at 812.266 kb on + strand at 812.332 kb on - strand at 812.346 kb on + strand at 812.353 kb on - strand at 812.354 kb on - strand at 812.459 kb on - strand at 812.485 kb on - strand at 814.583 kb on + strand at 814.584 kb on + strand at 814.584 kb on + strand at 814.608 kb on - strand at 814.659 kb on + strand at 814.671 kb on + strand at 814.683 kb on + strand at 814.683 kb on + strand at 814.683 kb on + strand at 814.683 kb on + strand at 814.683 kb on + strand at 814.683 kb on + strand at 814.683 kb on + strand at 814.686 kb on - strand at 814.691 kb on - strand at 814.691 kb on - strand at 814.691 kb on - strand at 814.691 kb on - strand at 814.691 kb on - strand at 814.691 kb on - strand at 814.695 kb on + strand at 814.703 kb on - strand at 814.706 kb on + strand at 814.740 kb on + strand at 814.748 kb on - strand at 814.794 kb on + strand at 814.830 kb on + strand at 814.831 kb on + strand at 814.831 kb on + strand at 814.838 kb on - strand at 814.842 kb on + strand at 814.851 kb on - strand at 814.874 kb on + strand at 814.926 kb on - strand at 814.954 kb on + strand at 814.962 kb on - strand at 814.962 kb on - strand at 814.976 kb on + strand at 814.980 kb on - strand at 815.002 kb on + strand at 815.010 kb on - strand at 815.021 kb on - strand at 815.038 kb on - strand at 815.043 kb on - strand at 815.043 kb on - strand at 815.128 kb on - strand at 815.128 kb on - strand at 815.171 kb on + strand at 815.181 kb on + strand at 815.182 kb on + strand at 815.189 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Fusidic 0.02 mg/ml remove 811,526 + Dsui_0804 0.31 -1.1 811,589 + Dsui_0804 0.36 -1.1 811,600 + Dsui_0804 0.37 -2.6 811,625 + Dsui_0804 0.39 -2.1 811,731 + -0.5 811,746 - Dsui_0804 0.50 -0.5 811,815 + Dsui_0804 0.56 +0.5 811,847 + Dsui_0804 0.59 -1.5 811,855 - Dsui_0804 0.60 -1.1 811,855 - Dsui_0804 0.60 +1.8 811,880 + Dsui_0804 0.62 -1.1 811,884 + Dsui_0804 0.62 -1.5 811,884 + +0.5 811,892 - Dsui_0804 0.63 +0.5 811,894 - Dsui_0804 0.63 -1.5 811,902 - Dsui_0804 0.64 +0.5 811,945 + Dsui_0804 0.68 -0.5 811,953 - Dsui_0804 0.68 +0.5 811,955 + Dsui_0804 0.68 -0.5 811,963 - Dsui_0804 0.69 -1.5 811,970 + Dsui_0804 0.70 -2.1 811,970 + Dsui_0804 0.70 -2.5 811,978 - Dsui_0804 0.70 -1.8 812,012 - Dsui_0804 0.73 -1.5 812,063 + Dsui_0804 0.78 -2.3 812,063 + Dsui_0804 0.78 -0.5 812,153 + Dsui_0804 0.86 +0.5 812,232 - -1.1 812,266 + -0.5 812,332 - +0.5 812,346 + -1.8 812,353 - -2.6 812,354 - +0.5 812,459 - +1.1 812,485 - +0.1 814,583 + -1.5 814,584 + +0.5 814,584 + -0.5 814,608 - -1.1 814,659 + +0.5 814,671 + +0.5 814,683 + -0.5 814,683 + +0.5 814,683 + -1.1 814,683 + +0.5 814,683 + -0.5 814,683 + -1.5 814,683 + +0.5 814,686 - +0.5 814,691 - -0.5 814,691 - -0.5 814,691 - -1.5 814,691 - +0.5 814,691 - +2.1 814,691 - +0.5 814,695 + +0.5 814,703 - -1.1 814,706 + +0.5 814,740 + +0.5 814,748 - +0.5 814,794 + -0.5 814,830 + +0.5 814,831 + -1.1 814,831 + -0.5 814,838 - -1.5 814,842 + +1.7 814,851 - +0.5 814,874 + +1.8 814,926 - -1.0 814,954 + -0.5 814,962 - +0.3 814,962 - +0.6 814,976 + +0.1 814,980 - -0.5 815,002 + +0.3 815,010 - -2.1 815,021 - +2.1 815,038 - +0.0 815,043 - -0.2 815,043 - +0.3 815,128 - +0.0 815,128 - -0.1 815,171 + -0.5 815,181 + -0.4 815,182 + +1.1 815,189 - -0.1
Or see this region's nucleotide sequence