Experiment: ALP with Fusidic 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0758 and Dsui_0759 are separated by 63 nucleotides Dsui_0759 and Dsui_0760 are separated by 7 nucleotides
Dsui_0758: Dsui_0758 - ATPase component of ABC transporters with duplicated ATPase domain, at 757,333 to 759,237
_0758
Dsui_0759: Dsui_0759 - ABC-type phosphate/phosphonate transport system, periplasmic component, at 759,301 to 760,137
_0759
Dsui_0760: Dsui_0760 - diguanylate cyclase (GGDEF) domain-containing protein, at 760,145 to 762,571
_0760
Position (kb) 759
760
761 Strain fitness (log2 ratio) -2
-1
0
1 at 758.312 kb on + strand, within Dsui_0758 at 758.315 kb on - strand, within Dsui_0758 at 758.392 kb on - strand, within Dsui_0758 at 758.430 kb on - strand, within Dsui_0758 at 758.621 kb on - strand at 758.658 kb on - strand at 758.768 kb on + strand, within Dsui_0758 at 758.827 kb on - strand, within Dsui_0758 at 758.890 kb on + strand, within Dsui_0758 at 758.921 kb on + strand, within Dsui_0758 at 758.929 kb on - strand at 759.040 kb on + strand, within Dsui_0758 at 759.094 kb on - strand at 759.110 kb on + strand at 759.167 kb on - strand at 759.207 kb on - strand at 759.268 kb on + strand at 759.294 kb on - strand at 759.380 kb on - strand at 759.387 kb on + strand, within Dsui_0759 at 759.418 kb on - strand, within Dsui_0759 at 759.428 kb on + strand, within Dsui_0759 at 759.454 kb on - strand, within Dsui_0759 at 759.471 kb on - strand, within Dsui_0759 at 759.509 kb on + strand, within Dsui_0759 at 759.516 kb on - strand, within Dsui_0759 at 759.565 kb on - strand, within Dsui_0759 at 759.607 kb on - strand, within Dsui_0759 at 759.665 kb on - strand, within Dsui_0759 at 759.668 kb on + strand, within Dsui_0759 at 759.676 kb on - strand, within Dsui_0759 at 759.713 kb on + strand, within Dsui_0759 at 759.713 kb on + strand, within Dsui_0759 at 759.728 kb on + strand, within Dsui_0759 at 759.812 kb on - strand, within Dsui_0759 at 759.837 kb on + strand, within Dsui_0759 at 759.845 kb on - strand, within Dsui_0759 at 759.878 kb on - strand, within Dsui_0759 at 759.929 kb on + strand, within Dsui_0759 at 759.939 kb on + strand, within Dsui_0759 at 759.986 kb on + strand, within Dsui_0759 at 760.004 kb on - strand, within Dsui_0759 at 760.107 kb on + strand at 760.115 kb on - strand at 760.148 kb on + strand at 760.150 kb on - strand at 760.171 kb on - strand at 760.189 kb on - strand at 760.225 kb on + strand at 760.241 kb on - strand at 760.258 kb on + strand at 760.274 kb on - strand at 760.426 kb on - strand at 760.570 kb on - strand, within Dsui_0760 at 760.572 kb on + strand, within Dsui_0760 at 760.672 kb on - strand, within Dsui_0760 at 760.715 kb on - strand, within Dsui_0760 at 760.904 kb on + strand, within Dsui_0760 at 760.924 kb on - strand at 760.937 kb on + strand, within Dsui_0760 at 761.046 kb on + strand, within Dsui_0760 at 761.073 kb on + strand, within Dsui_0760 at 761.077 kb on + strand, within Dsui_0760 at 761.088 kb on + strand, within Dsui_0760
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Fusidic 0.02 mg/ml remove 758,312 + Dsui_0758 0.51 -0.3 758,315 - Dsui_0758 0.52 -1.1 758,392 - Dsui_0758 0.56 +0.5 758,430 - Dsui_0758 0.58 -0.5 758,621 - +0.5 758,658 - +0.5 758,768 + Dsui_0758 0.75 -0.7 758,827 - Dsui_0758 0.78 -2.7 758,890 + Dsui_0758 0.82 -0.1 758,921 + Dsui_0758 0.83 +0.1 758,929 - +0.5 759,040 + Dsui_0758 0.90 +0.4 759,094 - -0.5 759,110 + -0.2 759,167 - -2.3 759,207 - -0.5 759,268 + -0.1 759,294 - +0.5 759,380 - +0.5 759,387 + Dsui_0759 0.10 +0.3 759,418 - Dsui_0759 0.14 -0.5 759,428 + Dsui_0759 0.15 -0.2 759,454 - Dsui_0759 0.18 -2.1 759,471 - Dsui_0759 0.20 -1.1 759,509 + Dsui_0759 0.25 +0.7 759,516 - Dsui_0759 0.26 +0.5 759,565 - Dsui_0759 0.32 -2.3 759,607 - Dsui_0759 0.37 -1.1 759,665 - Dsui_0759 0.43 -1.5 759,668 + Dsui_0759 0.44 +0.3 759,676 - Dsui_0759 0.45 -1.8 759,713 + Dsui_0759 0.49 -1.2 759,713 + Dsui_0759 0.49 -0.4 759,728 + Dsui_0759 0.51 +0.2 759,812 - Dsui_0759 0.61 +0.5 759,837 + Dsui_0759 0.64 -0.2 759,845 - Dsui_0759 0.65 +0.5 759,878 - Dsui_0759 0.69 -1.1 759,929 + Dsui_0759 0.75 +1.3 759,939 + Dsui_0759 0.76 -0.3 759,986 + Dsui_0759 0.82 -0.0 760,004 - Dsui_0759 0.84 -1.1 760,107 + -0.0 760,115 - -0.5 760,148 + +0.4 760,150 - +0.5 760,171 - -2.5 760,189 - -2.3 760,225 + +0.0 760,241 - +0.5 760,258 + +1.4 760,274 - -0.5 760,426 - +0.5 760,570 - Dsui_0760 0.18 -2.1 760,572 + Dsui_0760 0.18 +0.4 760,672 - Dsui_0760 0.22 -1.5 760,715 - Dsui_0760 0.23 -1.1 760,904 + Dsui_0760 0.31 -0.0 760,924 - +0.5 760,937 + Dsui_0760 0.33 -0.2 761,046 + Dsui_0760 0.37 +0.4 761,073 + Dsui_0760 0.38 +0.2 761,077 + Dsui_0760 0.38 -0.6 761,088 + Dsui_0760 0.39 +0.1
Or see this region's nucleotide sequence