Experiment: ALP with Fusidic 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0751 and Dsui_0752 are separated by 212 nucleotides Dsui_0752 and Dsui_0753 are separated by 130 nucleotides
Dsui_0751: Dsui_0751 - Eco57I restriction endonuclease, at 750,518 to 751,729
_0751
Dsui_0752: Dsui_0752 - hypothetical protein, at 751,942 to 752,103
_0752
Dsui_0753: Dsui_0753 - ATPase component of ABC transporters with duplicated ATPase domain, at 752,234 to 753,850
_0753
Position (kb) 751
752
753 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 750.947 kb on + strand at 750.965 kb on + strand, within Dsui_0751 at 750.980 kb on - strand, within Dsui_0751 at 751.044 kb on + strand, within Dsui_0751 at 751.051 kb on + strand, within Dsui_0751 at 751.052 kb on - strand, within Dsui_0751 at 751.059 kb on - strand, within Dsui_0751 at 751.106 kb on - strand, within Dsui_0751 at 751.170 kb on - strand, within Dsui_0751 at 751.184 kb on - strand, within Dsui_0751 at 751.188 kb on + strand, within Dsui_0751 at 751.191 kb on - strand, within Dsui_0751 at 751.193 kb on + strand, within Dsui_0751 at 751.317 kb on - strand, within Dsui_0751 at 751.398 kb on - strand, within Dsui_0751 at 751.458 kb on + strand, within Dsui_0751 at 751.458 kb on + strand, within Dsui_0751 at 751.466 kb on - strand, within Dsui_0751 at 751.466 kb on - strand, within Dsui_0751 at 751.466 kb on - strand, within Dsui_0751 at 751.509 kb on - strand, within Dsui_0751 at 751.514 kb on - strand, within Dsui_0751 at 751.624 kb on - strand at 751.666 kb on - strand at 751.717 kb on - strand at 751.743 kb on + strand at 751.745 kb on - strand at 751.745 kb on - strand at 751.745 kb on - strand at 751.778 kb on + strand at 751.778 kb on + strand at 751.783 kb on + strand at 751.785 kb on - strand at 751.821 kb on + strand at 751.821 kb on + strand at 751.829 kb on - strand at 751.876 kb on + strand at 751.876 kb on + strand at 751.876 kb on + strand at 751.876 kb on + strand at 751.876 kb on + strand at 751.876 kb on + strand at 751.876 kb on + strand at 751.876 kb on + strand at 751.884 kb on - strand at 751.884 kb on - strand at 751.884 kb on - strand at 751.884 kb on - strand at 751.884 kb on - strand at 751.884 kb on - strand at 751.894 kb on - strand at 751.914 kb on + strand at 751.914 kb on + strand at 751.914 kb on + strand at 751.933 kb on + strand at 751.978 kb on + strand, within Dsui_0752 at 752.028 kb on + strand, within Dsui_0752 at 752.035 kb on + strand, within Dsui_0752 at 752.036 kb on - strand, within Dsui_0752 at 752.036 kb on - strand at 752.036 kb on - strand, within Dsui_0752 at 752.040 kb on + strand, within Dsui_0752 at 752.048 kb on - strand, within Dsui_0752 at 752.059 kb on + strand, within Dsui_0752 at 752.271 kb on - strand at 752.329 kb on + strand at 752.419 kb on + strand, within Dsui_0753 at 752.438 kb on - strand, within Dsui_0753 at 752.571 kb on + strand, within Dsui_0753 at 752.680 kb on + strand, within Dsui_0753 at 752.684 kb on + strand, within Dsui_0753 at 752.731 kb on + strand, within Dsui_0753 at 752.734 kb on - strand at 752.867 kb on - strand at 752.892 kb on - strand, within Dsui_0753 at 752.969 kb on - strand, within Dsui_0753 at 753.012 kb on - strand, within Dsui_0753
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Fusidic 0.02 mg/ml remove 750,947 + +0.4 750,965 + Dsui_0751 0.37 -1.9 750,980 - Dsui_0751 0.38 +0.5 751,044 + Dsui_0751 0.43 -1.2 751,051 + Dsui_0751 0.44 -1.2 751,052 - Dsui_0751 0.44 -0.5 751,059 - Dsui_0751 0.45 +0.6 751,106 - Dsui_0751 0.49 -0.3 751,170 - Dsui_0751 0.54 +0.7 751,184 - Dsui_0751 0.55 +0.1 751,188 + Dsui_0751 0.55 -1.2 751,191 - Dsui_0751 0.56 +0.3 751,193 + Dsui_0751 0.56 -1.2 751,317 - Dsui_0751 0.66 +0.3 751,398 - Dsui_0751 0.73 -0.1 751,458 + Dsui_0751 0.78 -2.2 751,458 + Dsui_0751 0.78 -0.2 751,466 - Dsui_0751 0.78 +0.2 751,466 - Dsui_0751 0.78 +0.0 751,466 - Dsui_0751 0.78 +0.5 751,509 - Dsui_0751 0.82 +0.2 751,514 - Dsui_0751 0.82 +0.1 751,624 - +1.2 751,666 - +0.2 751,717 - +0.6 751,743 + -2.9 751,745 - -0.1 751,745 - +0.1 751,745 - -0.2 751,778 + +0.4 751,778 + -1.9 751,783 + -2.4 751,785 - -0.6 751,821 + +0.9 751,821 + +0.8 751,829 - -0.6 751,876 + +0.9 751,876 + +0.2 751,876 + +0.0 751,876 + +0.8 751,876 + +0.3 751,876 + +0.5 751,876 + +0.2 751,876 + +0.2 751,884 - -1.1 751,884 - +0.4 751,884 - +0.4 751,884 - +0.4 751,884 - -1.1 751,884 - -0.6 751,894 - +0.4 751,914 + +0.7 751,914 + +0.4 751,914 + -0.1 751,933 + +0.4 751,978 + Dsui_0752 0.22 +0.2 752,028 + Dsui_0752 0.53 +0.3 752,035 + Dsui_0752 0.57 +0.4 752,036 - Dsui_0752 0.58 -0.6 752,036 - -0.6 752,036 - Dsui_0752 0.58 +0.4 752,040 + Dsui_0752 0.60 +1.2 752,048 - Dsui_0752 0.65 -1.9 752,059 + Dsui_0752 0.72 +1.2 752,271 - -0.6 752,329 + +0.9 752,419 + Dsui_0753 0.11 +0.8 752,438 - Dsui_0753 0.13 -0.6 752,571 + Dsui_0753 0.21 +1.0 752,680 + Dsui_0753 0.28 +1.0 752,684 + Dsui_0753 0.28 +2.1 752,731 + Dsui_0753 0.31 +1.7 752,734 - +0.4 752,867 - -0.6 752,892 - Dsui_0753 0.41 +0.4 752,969 - Dsui_0753 0.45 -1.6 753,012 - Dsui_0753 0.48 -0.3
Or see this region's nucleotide sequence