Experiment: ALP with Fusidic 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0693 and Dsui_0694 are separated by 90 nucleotides Dsui_0694 and Dsui_0695 are separated by 21 nucleotides
Dsui_0693: Dsui_0693 - hypothetical protein, at 688,517 to 689,674
_0693
Dsui_0694: Dsui_0694 - dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein, at 689,765 to 690,520
_0694
Dsui_0695: Dsui_0695 - putative ATPase of the PP-loop superfamily implicated in cell cycle control, at 690,542 to 691,441
_0695
Position (kb) 689
690
691 Strain fitness (log2 ratio) -2
-1
0
1
2 at 689.751 kb on + strand at 689.759 kb on - strand at 689.782 kb on + strand at 689.872 kb on + strand, within Dsui_0694 at 689.979 kb on + strand, within Dsui_0694 at 689.979 kb on + strand, within Dsui_0694 at 689.979 kb on + strand, within Dsui_0694 at 689.984 kb on + strand, within Dsui_0694 at 690.071 kb on + strand, within Dsui_0694 at 690.071 kb on + strand, within Dsui_0694 at 690.071 kb on + strand, within Dsui_0694 at 690.071 kb on + strand, within Dsui_0694 at 690.071 kb on + strand, within Dsui_0694 at 690.079 kb on - strand at 690.079 kb on - strand at 690.079 kb on - strand at 690.079 kb on - strand, within Dsui_0694 at 690.107 kb on - strand at 690.129 kb on - strand, within Dsui_0694 at 690.131 kb on + strand, within Dsui_0694 at 690.202 kb on + strand, within Dsui_0694 at 690.229 kb on - strand at 690.233 kb on + strand, within Dsui_0694 at 690.252 kb on + strand, within Dsui_0694 at 690.277 kb on + strand, within Dsui_0694 at 690.497 kb on - strand at 690.497 kb on - strand at 690.517 kb on - strand at 690.548 kb on + strand at 690.550 kb on + strand at 690.550 kb on + strand at 690.550 kb on + strand at 690.550 kb on + strand at 690.558 kb on + strand at 690.558 kb on - strand at 690.641 kb on + strand, within Dsui_0695 at 690.641 kb on + strand, within Dsui_0695 at 690.641 kb on + strand, within Dsui_0695 at 690.649 kb on - strand, within Dsui_0695 at 690.649 kb on - strand at 690.649 kb on - strand, within Dsui_0695 at 690.701 kb on + strand, within Dsui_0695 at 690.800 kb on - strand, within Dsui_0695 at 690.829 kb on + strand, within Dsui_0695 at 690.837 kb on + strand, within Dsui_0695 at 690.845 kb on - strand, within Dsui_0695 at 690.896 kb on + strand, within Dsui_0695 at 690.899 kb on - strand, within Dsui_0695 at 691.026 kb on - strand, within Dsui_0695 at 691.114 kb on + strand, within Dsui_0695 at 691.143 kb on + strand, within Dsui_0695 at 691.181 kb on + strand, within Dsui_0695 at 691.269 kb on + strand, within Dsui_0695 at 691.319 kb on + strand, within Dsui_0695 at 691.420 kb on + strand at 691.435 kb on + strand at 691.499 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Fusidic 0.02 mg/ml remove 689,751 + +0.4 689,759 - -1.2 689,782 + +0.2 689,872 + Dsui_0694 0.14 +0.6 689,979 + Dsui_0694 0.28 +1.4 689,979 + Dsui_0694 0.28 +0.5 689,979 + Dsui_0694 0.28 +0.8 689,984 + Dsui_0694 0.29 +1.8 690,071 + Dsui_0694 0.40 +1.1 690,071 + Dsui_0694 0.40 +0.6 690,071 + Dsui_0694 0.40 +0.7 690,071 + Dsui_0694 0.40 +0.8 690,071 + Dsui_0694 0.40 +1.1 690,079 - -1.2 690,079 - +0.4 690,079 - +0.4 690,079 - Dsui_0694 0.42 -0.6 690,107 - +0.4 690,129 - Dsui_0694 0.48 +0.4 690,131 + Dsui_0694 0.48 +1.3 690,202 + Dsui_0694 0.58 +0.8 690,229 - -0.6 690,233 + Dsui_0694 0.62 -0.1 690,252 + Dsui_0694 0.64 +0.7 690,277 + Dsui_0694 0.68 +0.9 690,497 - -1.6 690,497 - +0.4 690,517 - -0.6 690,548 + -1.0 690,550 + -0.6 690,550 + -0.8 690,550 + +0.6 690,550 + +1.2 690,558 + -0.4 690,558 - -1.9 690,641 + Dsui_0695 0.11 -0.4 690,641 + Dsui_0695 0.11 -0.0 690,641 + Dsui_0695 0.11 -0.5 690,649 - Dsui_0695 0.12 +0.4 690,649 - +0.4 690,649 - Dsui_0695 0.12 -1.9 690,701 + Dsui_0695 0.18 -0.8 690,800 - Dsui_0695 0.29 +0.4 690,829 + Dsui_0695 0.32 +0.3 690,837 + Dsui_0695 0.33 -0.3 690,845 - Dsui_0695 0.34 -0.6 690,896 + Dsui_0695 0.39 -0.1 690,899 - Dsui_0695 0.40 -0.6 691,026 - Dsui_0695 0.54 -1.2 691,114 + Dsui_0695 0.64 -0.6 691,143 + Dsui_0695 0.67 -0.7 691,181 + Dsui_0695 0.71 -0.0 691,269 + Dsui_0695 0.81 -0.0 691,319 + Dsui_0695 0.86 +0.1 691,420 + -0.1 691,435 + +0.2 691,499 + -0.2
Or see this region's nucleotide sequence