Experiment: ALP with Fusidic 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0691 and Dsui_0692 are separated by 17 nucleotides Dsui_0692 and Dsui_0693 are separated by 82 nucleotides Dsui_0693 and Dsui_0694 are separated by 90 nucleotides Dsui_0694 and Dsui_0695 are separated by 21 nucleotides
Dsui_0691: Dsui_0691 - hypothetical protein, at 687,365 to 687,562
_0691
Dsui_0692: Dsui_0692 - hypothetical protein, at 687,580 to 688,434
_0692
Dsui_0693: Dsui_0693 - hypothetical protein, at 688,517 to 689,674
_0693
Dsui_0694: Dsui_0694 - dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein, at 689,765 to 690,520
_0694
Dsui_0695: Dsui_0695 - putative ATPase of the PP-loop superfamily implicated in cell cycle control, at 690,542 to 691,441
_0695
Position (kb) 688
689
690 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 687.539 kb on - strand, within Dsui_0691 at 687.556 kb on + strand at 687.581 kb on - strand at 687.647 kb on + strand at 687.655 kb on - strand at 687.716 kb on - strand, within Dsui_0692 at 687.748 kb on - strand at 687.756 kb on + strand, within Dsui_0692 at 687.786 kb on + strand, within Dsui_0692 at 687.856 kb on - strand, within Dsui_0692 at 687.873 kb on - strand, within Dsui_0692 at 687.965 kb on + strand, within Dsui_0692 at 688.002 kb on + strand at 688.084 kb on + strand, within Dsui_0692 at 688.093 kb on - strand, within Dsui_0692 at 688.144 kb on + strand, within Dsui_0692 at 688.171 kb on + strand at 688.194 kb on - strand, within Dsui_0692 at 688.286 kb on + strand, within Dsui_0692 at 688.294 kb on - strand, within Dsui_0692 at 688.316 kb on + strand, within Dsui_0692 at 688.348 kb on - strand, within Dsui_0692 at 688.397 kb on - strand at 688.425 kb on - strand at 688.467 kb on + strand at 688.522 kb on + strand at 688.524 kb on - strand at 689.751 kb on + strand at 689.759 kb on - strand at 689.782 kb on + strand at 689.872 kb on + strand, within Dsui_0694 at 689.979 kb on + strand, within Dsui_0694 at 689.979 kb on + strand, within Dsui_0694 at 689.979 kb on + strand, within Dsui_0694 at 689.984 kb on + strand, within Dsui_0694 at 690.071 kb on + strand, within Dsui_0694 at 690.071 kb on + strand, within Dsui_0694 at 690.071 kb on + strand, within Dsui_0694 at 690.071 kb on + strand, within Dsui_0694 at 690.071 kb on + strand, within Dsui_0694 at 690.079 kb on - strand at 690.079 kb on - strand at 690.079 kb on - strand at 690.079 kb on - strand, within Dsui_0694 at 690.107 kb on - strand at 690.129 kb on - strand, within Dsui_0694 at 690.131 kb on + strand, within Dsui_0694 at 690.202 kb on + strand, within Dsui_0694 at 690.229 kb on - strand at 690.233 kb on + strand, within Dsui_0694 at 690.252 kb on + strand, within Dsui_0694 at 690.277 kb on + strand, within Dsui_0694 at 690.497 kb on - strand at 690.497 kb on - strand at 690.517 kb on - strand at 690.548 kb on + strand at 690.550 kb on + strand at 690.550 kb on + strand at 690.550 kb on + strand at 690.550 kb on + strand at 690.558 kb on + strand at 690.558 kb on - strand at 690.641 kb on + strand, within Dsui_0695 at 690.641 kb on + strand, within Dsui_0695 at 690.641 kb on + strand, within Dsui_0695 at 690.649 kb on - strand, within Dsui_0695 at 690.649 kb on - strand at 690.649 kb on - strand, within Dsui_0695
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Fusidic 0.02 mg/ml remove 687,539 - Dsui_0691 0.88 -2.6 687,556 + +0.4 687,581 - -2.4 687,647 + +0.4 687,655 - +0.8 687,716 - Dsui_0692 0.16 +0.4 687,748 - +0.4 687,756 + Dsui_0692 0.21 -2.2 687,786 + Dsui_0692 0.24 -1.2 687,856 - Dsui_0692 0.32 -0.6 687,873 - Dsui_0692 0.34 -1.6 687,965 + Dsui_0692 0.45 -2.6 688,002 + -1.2 688,084 + Dsui_0692 0.59 +0.4 688,093 - Dsui_0692 0.60 -2.4 688,144 + Dsui_0692 0.66 -1.9 688,171 + -0.6 688,194 - Dsui_0692 0.72 +0.4 688,286 + Dsui_0692 0.83 -2.8 688,294 - Dsui_0692 0.84 -0.1 688,316 + Dsui_0692 0.86 -2.6 688,348 - Dsui_0692 0.90 -0.3 688,397 - +0.4 688,425 - +0.0 688,467 + -1.6 688,522 + +2.4 688,524 - +0.1 689,751 + +0.4 689,759 - -1.2 689,782 + +0.2 689,872 + Dsui_0694 0.14 +0.6 689,979 + Dsui_0694 0.28 +1.4 689,979 + Dsui_0694 0.28 +0.5 689,979 + Dsui_0694 0.28 +0.8 689,984 + Dsui_0694 0.29 +1.8 690,071 + Dsui_0694 0.40 +1.1 690,071 + Dsui_0694 0.40 +0.6 690,071 + Dsui_0694 0.40 +0.7 690,071 + Dsui_0694 0.40 +0.8 690,071 + Dsui_0694 0.40 +1.1 690,079 - -1.2 690,079 - +0.4 690,079 - +0.4 690,079 - Dsui_0694 0.42 -0.6 690,107 - +0.4 690,129 - Dsui_0694 0.48 +0.4 690,131 + Dsui_0694 0.48 +1.3 690,202 + Dsui_0694 0.58 +0.8 690,229 - -0.6 690,233 + Dsui_0694 0.62 -0.1 690,252 + Dsui_0694 0.64 +0.7 690,277 + Dsui_0694 0.68 +0.9 690,497 - -1.6 690,497 - +0.4 690,517 - -0.6 690,548 + -1.0 690,550 + -0.6 690,550 + -0.8 690,550 + +0.6 690,550 + +1.2 690,558 + -0.4 690,558 - -1.9 690,641 + Dsui_0695 0.11 -0.4 690,641 + Dsui_0695 0.11 -0.0 690,641 + Dsui_0695 0.11 -0.5 690,649 - Dsui_0695 0.12 +0.4 690,649 - +0.4 690,649 - Dsui_0695 0.12 -1.9
Or see this region's nucleotide sequence