Experiment: ALP with Fusidic 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0688 and Dsui_0689 overlap by 1 nucleotides Dsui_0689 and Dsui_0690 are separated by 72 nucleotides Dsui_0690 and Dsui_0691 are separated by 160 nucleotides Dsui_0691 and Dsui_0692 are separated by 17 nucleotides
Dsui_0688: Dsui_0688 - glutathione S-transferase, at 685,508 to 686,125
_0688
Dsui_0689: Dsui_0689 - lysophospholipase, at 686,125 to 686,937
_0689
Dsui_0690: Dsui_0690 - hypothetical protein, at 687,010 to 687,204
_0690
Dsui_0691: Dsui_0691 - hypothetical protein, at 687,365 to 687,562
_0691
Dsui_0692: Dsui_0692 - hypothetical protein, at 687,580 to 688,434
_0692
Position (kb) 687
688 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 686.106 kb on + strand at 686.114 kb on - strand at 686.114 kb on - strand at 686.190 kb on + strand at 686.329 kb on + strand at 686.329 kb on + strand, within Dsui_0689 at 686.435 kb on - strand, within Dsui_0689 at 686.446 kb on + strand, within Dsui_0689 at 686.485 kb on + strand, within Dsui_0689 at 686.559 kb on + strand, within Dsui_0689 at 686.588 kb on - strand, within Dsui_0689 at 686.797 kb on + strand, within Dsui_0689 at 686.905 kb on + strand at 686.925 kb on - strand at 686.998 kb on + strand at 687.016 kb on - strand at 687.028 kb on - strand at 687.051 kb on + strand, within Dsui_0690 at 687.059 kb on - strand, within Dsui_0690 at 687.069 kb on - strand, within Dsui_0690 at 687.095 kb on + strand, within Dsui_0690 at 687.110 kb on + strand, within Dsui_0690 at 687.129 kb on - strand, within Dsui_0690 at 687.144 kb on + strand at 687.159 kb on - strand, within Dsui_0690 at 687.214 kb on - strand at 687.288 kb on + strand at 687.294 kb on + strand at 687.311 kb on + strand at 687.311 kb on + strand at 687.311 kb on + strand at 687.311 kb on + strand at 687.311 kb on + strand at 687.319 kb on - strand at 687.319 kb on - strand at 687.342 kb on + strand at 687.348 kb on - strand at 687.386 kb on + strand, within Dsui_0691 at 687.466 kb on + strand, within Dsui_0691 at 687.539 kb on - strand, within Dsui_0691 at 687.556 kb on + strand at 687.581 kb on - strand at 687.647 kb on + strand at 687.655 kb on - strand at 687.716 kb on - strand, within Dsui_0692 at 687.748 kb on - strand at 687.756 kb on + strand, within Dsui_0692 at 687.786 kb on + strand, within Dsui_0692 at 687.856 kb on - strand, within Dsui_0692 at 687.873 kb on - strand, within Dsui_0692 at 687.965 kb on + strand, within Dsui_0692 at 688.002 kb on + strand at 688.084 kb on + strand, within Dsui_0692 at 688.093 kb on - strand, within Dsui_0692 at 688.144 kb on + strand, within Dsui_0692 at 688.171 kb on + strand at 688.194 kb on - strand, within Dsui_0692
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Fusidic 0.02 mg/ml remove 686,106 + -0.6 686,114 - -1.6 686,114 - -1.6 686,190 + -1.4 686,329 + -0.6 686,329 + Dsui_0689 0.25 -2.0 686,435 - Dsui_0689 0.38 -1.9 686,446 + Dsui_0689 0.39 -0.2 686,485 + Dsui_0689 0.44 +0.5 686,559 + Dsui_0689 0.53 -0.1 686,588 - Dsui_0689 0.57 +0.4 686,797 + Dsui_0689 0.83 +0.8 686,905 + +0.2 686,925 - +1.0 686,998 + -1.9 687,016 - +0.7 687,028 - +0.2 687,051 + Dsui_0690 0.21 -2.4 687,059 - Dsui_0690 0.25 -0.4 687,069 - Dsui_0690 0.30 -0.2 687,095 + Dsui_0690 0.44 -3.6 687,110 + Dsui_0690 0.51 +0.4 687,129 - Dsui_0690 0.61 -0.9 687,144 + -0.6 687,159 - Dsui_0690 0.76 -0.3 687,214 - -0.2 687,288 + -1.2 687,294 + +1.6 687,311 + -1.6 687,311 + -1.2 687,311 + -0.6 687,311 + -0.6 687,311 + -1.2 687,319 - -1.9 687,319 - -2.2 687,342 + +0.4 687,348 - +0.4 687,386 + Dsui_0691 0.11 -1.2 687,466 + Dsui_0691 0.51 +0.4 687,539 - Dsui_0691 0.88 -2.6 687,556 + +0.4 687,581 - -2.4 687,647 + +0.4 687,655 - +0.8 687,716 - Dsui_0692 0.16 +0.4 687,748 - +0.4 687,756 + Dsui_0692 0.21 -2.2 687,786 + Dsui_0692 0.24 -1.2 687,856 - Dsui_0692 0.32 -0.6 687,873 - Dsui_0692 0.34 -1.6 687,965 + Dsui_0692 0.45 -2.6 688,002 + -1.2 688,084 + Dsui_0692 0.59 +0.4 688,093 - Dsui_0692 0.60 -2.4 688,144 + Dsui_0692 0.66 -1.9 688,171 + -0.6 688,194 - Dsui_0692 0.72 +0.4
Or see this region's nucleotide sequence