Experiment: ALP with Fusidic 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0681 and Dsui_0682 are separated by 161 nucleotides Dsui_0682 and Dsui_0683 are separated by 161 nucleotides
Dsui_0681: Dsui_0681 - ABC-type Fe3+-hydroxamate transport system, periplasmic component, at 678,563 to 679,372
_0681
Dsui_0682: Dsui_0682 - 5,10-methenyltetrahydrofolate synthetase, at 679,534 to 680,127
_0682
Dsui_0683: Dsui_0683 - soluble lytic murein transglycosylase-like protein, at 680,289 to 682,277
_0683
Position (kb) 679
680
681 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 678.541 kb on + strand at 678.732 kb on - strand at 678.766 kb on + strand, within Dsui_0681 at 678.859 kb on - strand, within Dsui_0681 at 678.885 kb on + strand, within Dsui_0681 at 678.892 kb on + strand, within Dsui_0681 at 679.210 kb on + strand, within Dsui_0681 at 679.210 kb on + strand, within Dsui_0681 at 679.210 kb on + strand, within Dsui_0681 at 679.236 kb on + strand, within Dsui_0681 at 679.236 kb on + strand, within Dsui_0681 at 679.244 kb on - strand, within Dsui_0681 at 679.244 kb on - strand, within Dsui_0681 at 679.244 kb on - strand, within Dsui_0681 at 679.280 kb on - strand, within Dsui_0681 at 679.331 kb on + strand at 679.339 kb on - strand at 680.121 kb on - strand at 680.173 kb on + strand at 680.181 kb on - strand at 680.186 kb on - strand at 680.254 kb on + strand at 680.257 kb on - strand at 680.299 kb on + strand at 680.306 kb on - strand at 680.338 kb on + strand at 680.346 kb on - strand at 680.502 kb on - strand, within Dsui_0683 at 680.525 kb on + strand, within Dsui_0683 at 680.545 kb on - strand at 680.593 kb on - strand at 680.642 kb on + strand, within Dsui_0683 at 680.738 kb on + strand, within Dsui_0683 at 680.804 kb on - strand, within Dsui_0683 at 680.816 kb on - strand, within Dsui_0683 at 680.899 kb on - strand at 680.913 kb on + strand, within Dsui_0683 at 680.913 kb on + strand, within Dsui_0683 at 680.913 kb on + strand, within Dsui_0683 at 680.918 kb on + strand, within Dsui_0683 at 681.007 kb on - strand, within Dsui_0683
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Fusidic 0.02 mg/ml remove 678,541 + -0.1 678,732 - -0.5 678,766 + Dsui_0681 0.25 -1.1 678,859 - Dsui_0681 0.37 -1.1 678,885 + Dsui_0681 0.40 +0.6 678,892 + Dsui_0681 0.41 +0.5 679,210 + Dsui_0681 0.80 -1.5 679,210 + Dsui_0681 0.80 +1.0 679,210 + Dsui_0681 0.80 +1.5 679,236 + Dsui_0681 0.83 -1.7 679,236 + Dsui_0681 0.83 +0.7 679,244 - Dsui_0681 0.84 -1.9 679,244 - Dsui_0681 0.84 -1.5 679,244 - Dsui_0681 0.84 +0.5 679,280 - Dsui_0681 0.89 +0.5 679,331 + -1.5 679,339 - -3.0 680,121 - +0.1 680,173 + -0.5 680,181 - -0.1 680,186 - +1.1 680,254 + +0.8 680,257 - -0.8 680,299 + -2.4 680,306 - -1.1 680,338 + -2.5 680,346 - -0.5 680,502 - Dsui_0683 0.11 -1.1 680,525 + Dsui_0683 0.12 -2.2 680,545 - +0.5 680,593 - +0.5 680,642 + Dsui_0683 0.18 -3.2 680,738 + Dsui_0683 0.23 -1.8 680,804 - Dsui_0683 0.26 +0.5 680,816 - Dsui_0683 0.26 -1.5 680,899 - +0.5 680,913 + Dsui_0683 0.31 -0.5 680,913 + Dsui_0683 0.31 -2.2 680,913 + Dsui_0683 0.31 -2.4 680,918 + Dsui_0683 0.32 -2.3 681,007 - Dsui_0683 0.36 -1.5
Or see this region's nucleotide sequence