Experiment: ALP with Fusidic 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0582 and Dsui_0583 are separated by 76 nucleotides Dsui_0583 and Dsui_0584 overlap by 4 nucleotides Dsui_0584 and Dsui_0585 are separated by 7 nucleotides
Dsui_0582: Dsui_0582 - anti-anti-sigma regulatory factor (antagonist of anti-sigma factor), at 579,788 to 581,017
_0582
Dsui_0583: Dsui_0583 - ABC-type Mn2+/Zn2+ transport system, permease component, at 581,094 to 581,912
_0583
Dsui_0584: Dsui_0584 - ATPase component of Mn/Zn ABC-type transporter, at 581,909 to 582,502
_0584
Dsui_0585: Dsui_0585 - ABC-type metal ion transport system, periplasmic component/surface adhesin, at 582,510 to 583,403
_0585
Position (kb) 581
582 Strain fitness (log2 ratio) -2
-1
0
1
2 at 580.134 kb on - strand, within Dsui_0582 at 580.168 kb on - strand, within Dsui_0582 at 580.389 kb on + strand at 580.389 kb on + strand at 580.397 kb on - strand, within Dsui_0582 at 580.590 kb on - strand, within Dsui_0582 at 580.746 kb on - strand, within Dsui_0582 at 580.758 kb on + strand at 580.767 kb on - strand, within Dsui_0582 at 580.875 kb on + strand, within Dsui_0582 at 580.883 kb on - strand, within Dsui_0582 at 580.975 kb on + strand at 580.984 kb on - strand at 580.992 kb on - strand at 581.053 kb on + strand at 581.061 kb on - strand at 581.067 kb on + strand at 581.069 kb on - strand at 581.168 kb on + strand at 581.171 kb on - strand at 581.196 kb on - strand, within Dsui_0583 at 581.320 kb on - strand, within Dsui_0583 at 581.390 kb on - strand, within Dsui_0583 at 581.417 kb on - strand, within Dsui_0583 at 581.469 kb on + strand at 581.555 kb on - strand, within Dsui_0583 at 581.609 kb on + strand at 581.744 kb on - strand, within Dsui_0583 at 581.827 kb on - strand, within Dsui_0583 at 581.921 kb on - strand at 581.984 kb on - strand at 582.372 kb on + strand, within Dsui_0584 at 582.406 kb on + strand, within Dsui_0584 at 582.451 kb on - strand at 582.481 kb on - strand at 582.485 kb on + strand at 582.516 kb on - strand at 582.531 kb on - strand at 582.570 kb on + strand at 582.688 kb on + strand at 582.781 kb on - strand at 582.835 kb on + strand, within Dsui_0585 at 582.835 kb on + strand, within Dsui_0585 at 582.858 kb on - strand, within Dsui_0585
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Fusidic 0.02 mg/ml remove 580,134 - Dsui_0582 0.28 -0.5 580,168 - Dsui_0582 0.31 -0.3 580,389 + +0.4 580,389 + +0.4 580,397 - Dsui_0582 0.50 -0.2 580,590 - Dsui_0582 0.65 -0.3 580,746 - Dsui_0582 0.78 -0.6 580,758 + +0.4 580,767 - Dsui_0582 0.80 +0.3 580,875 + Dsui_0582 0.88 -0.5 580,883 - Dsui_0582 0.89 +0.3 580,975 + -1.9 580,984 - -0.3 580,992 - -0.2 581,053 + -2.2 581,061 - -0.3 581,067 + -2.2 581,069 - +1.3 581,168 + +0.4 581,171 - -2.0 581,196 - Dsui_0583 0.12 +0.4 581,320 - Dsui_0583 0.28 +0.1 581,390 - Dsui_0583 0.36 +0.8 581,417 - Dsui_0583 0.39 +0.4 581,469 + +0.4 581,555 - Dsui_0583 0.56 +1.0 581,609 + +0.4 581,744 - Dsui_0583 0.79 +0.9 581,827 - Dsui_0583 0.89 +0.4 581,921 - +2.4 581,984 - -1.2 582,372 + Dsui_0584 0.78 -0.9 582,406 + Dsui_0584 0.84 -0.6 582,451 - -0.5 582,481 - -0.7 582,485 + -0.6 582,516 - -0.1 582,531 - -0.3 582,570 + -2.4 582,688 + +0.4 582,781 - +0.4 582,835 + Dsui_0585 0.36 -0.6 582,835 + Dsui_0585 0.36 +0.4 582,858 - Dsui_0585 0.39 -0.6
Or see this region's nucleotide sequence