Experiment: ALP with Fusidic 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0491 and Dsui_0492 are separated by 144 nucleotides Dsui_0492 and Dsui_0493 are separated by 5 nucleotides Dsui_0493 and Dsui_0494 are separated by 13 nucleotides
Dsui_0491: Dsui_0491 - putative oxygen-independent coproporphyrinogen III oxidase, at 493,858 to 495,096
_0491
Dsui_0492: Dsui_0492 - non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family, at 495,241 to 495,831
_0492
Dsui_0493: Dsui_0493 - hypothetical protein, at 495,837 to 496,745
_0493
Dsui_0494: Dsui_0494 - ribonuclease PH, at 496,759 to 497,475
_0494
Position (kb)
495
496 Strain fitness (log2 ratio)
-2
-1
0
1 at 494.426 kb on - strand, within Dsui_0491 at 494.495 kb on + strand at 494.500 kb on + strand, within Dsui_0491 at 494.573 kb on + strand, within Dsui_0491 at 494.593 kb on - strand, within Dsui_0491 at 494.609 kb on + strand, within Dsui_0491 at 494.609 kb on + strand, within Dsui_0491 at 494.610 kb on - strand, within Dsui_0491 at 494.715 kb on + strand, within Dsui_0491 at 494.755 kb on + strand, within Dsui_0491 at 494.800 kb on - strand, within Dsui_0491 at 494.810 kb on - strand, within Dsui_0491 at 494.810 kb on - strand, within Dsui_0491 at 494.810 kb on - strand, within Dsui_0491 at 494.855 kb on - strand, within Dsui_0491 at 494.923 kb on + strand, within Dsui_0491 at 494.980 kb on + strand at 495.155 kb on + strand at 495.202 kb on - strand at 495.238 kb on + strand at 495.487 kb on - strand, within Dsui_0492 at 495.598 kb on + strand, within Dsui_0492 at 495.765 kb on - strand, within Dsui_0492 at 495.772 kb on - strand, within Dsui_0492 at 495.772 kb on - strand, within Dsui_0492 at 495.775 kb on + strand at 495.808 kb on - strand at 495.828 kb on + strand at 495.833 kb on + strand at 495.833 kb on + strand at 495.833 kb on + strand at 495.841 kb on - strand at 495.841 kb on - strand at 496.081 kb on - strand, within Dsui_0493 at 496.255 kb on + strand, within Dsui_0493 at 496.277 kb on + strand, within Dsui_0493 at 496.526 kb on - strand, within Dsui_0493 at 496.639 kb on + strand, within Dsui_0493 at 496.647 kb on - strand, within Dsui_0493 at 496.668 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Fusidic 0.02 mg/ml remove 494,426 - Dsui_0491 0.46 -1.7 494,495 + +0.4 494,500 + Dsui_0491 0.52 -1.6 494,573 + Dsui_0491 0.58 +0.4 494,593 - Dsui_0491 0.59 -1.0 494,609 + Dsui_0491 0.61 -1.2 494,609 + Dsui_0491 0.61 -2.2 494,610 - Dsui_0491 0.61 -1.2 494,715 + Dsui_0491 0.69 -0.6 494,755 + Dsui_0491 0.72 -1.2 494,800 - Dsui_0491 0.76 -0.2 494,810 - Dsui_0491 0.77 -1.2 494,810 - Dsui_0491 0.77 -1.1 494,810 - Dsui_0491 0.77 -1.7 494,855 - Dsui_0491 0.80 -0.4 494,923 + Dsui_0491 0.86 +0.4 494,980 + -1.8 495,155 + +0.4 495,202 - -0.2 495,238 + -2.4 495,487 - Dsui_0492 0.42 -0.4 495,598 + Dsui_0492 0.60 -0.6 495,765 - Dsui_0492 0.89 -0.1 495,772 - Dsui_0492 0.90 +0.4 495,772 - Dsui_0492 0.90 -0.0 495,775 + +0.4 495,808 - +0.6 495,828 + -1.2 495,833 + -0.6 495,833 + -0.6 495,833 + -1.6 495,841 - -0.0 495,841 - -0.3 496,081 - Dsui_0493 0.27 +0.3 496,255 + Dsui_0493 0.46 -0.6 496,277 + Dsui_0493 0.48 -2.4 496,526 - Dsui_0493 0.76 +0.4 496,639 + Dsui_0493 0.88 -1.6 496,647 - Dsui_0493 0.89 -0.1 496,668 - -0.5
Or see this region's nucleotide sequence