Experiment: ALP with Fusidic 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0490 and Dsui_0491 overlap by 4 nucleotides Dsui_0491 and Dsui_0492 are separated by 144 nucleotides Dsui_0492 and Dsui_0493 are separated by 5 nucleotides
Dsui_0490: Dsui_0490 - putative ATPase, at 492,341 to 493,861
_0490
Dsui_0491: Dsui_0491 - putative oxygen-independent coproporphyrinogen III oxidase, at 493,858 to 495,096
_0491
Dsui_0492: Dsui_0492 - non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family, at 495,241 to 495,831
_0492
Dsui_0493: Dsui_0493 - hypothetical protein, at 495,837 to 496,745
_0493
Position (kb) 493
494
495
496 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 492.907 kb on - strand, within Dsui_0490 at 492.927 kb on - strand, within Dsui_0490 at 492.967 kb on + strand, within Dsui_0490 at 492.977 kb on + strand, within Dsui_0490 at 493.086 kb on + strand, within Dsui_0490 at 493.238 kb on + strand, within Dsui_0490 at 493.304 kb on - strand, within Dsui_0490 at 493.335 kb on - strand, within Dsui_0490 at 493.357 kb on - strand, within Dsui_0490 at 493.358 kb on - strand, within Dsui_0490 at 493.598 kb on - strand, within Dsui_0490 at 493.627 kb on + strand, within Dsui_0490 at 493.635 kb on - strand, within Dsui_0490 at 493.650 kb on - strand, within Dsui_0490 at 493.829 kb on + strand at 493.846 kb on - strand at 493.942 kb on + strand at 494.018 kb on - strand, within Dsui_0491 at 494.085 kb on + strand, within Dsui_0491 at 494.169 kb on - strand, within Dsui_0491 at 494.208 kb on - strand, within Dsui_0491 at 494.426 kb on - strand, within Dsui_0491 at 494.495 kb on + strand at 494.500 kb on + strand, within Dsui_0491 at 494.573 kb on + strand, within Dsui_0491 at 494.593 kb on - strand, within Dsui_0491 at 494.609 kb on + strand, within Dsui_0491 at 494.609 kb on + strand, within Dsui_0491 at 494.610 kb on - strand, within Dsui_0491 at 494.715 kb on + strand, within Dsui_0491 at 494.755 kb on + strand, within Dsui_0491 at 494.800 kb on - strand, within Dsui_0491 at 494.810 kb on - strand, within Dsui_0491 at 494.810 kb on - strand, within Dsui_0491 at 494.810 kb on - strand, within Dsui_0491 at 494.855 kb on - strand, within Dsui_0491 at 494.923 kb on + strand, within Dsui_0491 at 494.980 kb on + strand at 495.155 kb on + strand at 495.202 kb on - strand at 495.238 kb on + strand at 495.487 kb on - strand, within Dsui_0492 at 495.598 kb on + strand, within Dsui_0492 at 495.765 kb on - strand, within Dsui_0492 at 495.772 kb on - strand, within Dsui_0492 at 495.772 kb on - strand, within Dsui_0492 at 495.775 kb on + strand at 495.808 kb on - strand at 495.828 kb on + strand at 495.833 kb on + strand at 495.833 kb on + strand at 495.833 kb on + strand at 495.841 kb on - strand at 495.841 kb on - strand at 496.081 kb on - strand, within Dsui_0493
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Fusidic 0.02 mg/ml remove 492,907 - Dsui_0490 0.37 -0.6 492,927 - Dsui_0490 0.39 +0.4 492,967 + Dsui_0490 0.41 -1.5 492,977 + Dsui_0490 0.42 +0.2 493,086 + Dsui_0490 0.49 -0.5 493,238 + Dsui_0490 0.59 +0.4 493,304 - Dsui_0490 0.63 -0.6 493,335 - Dsui_0490 0.65 +0.4 493,357 - Dsui_0490 0.67 -1.2 493,358 - Dsui_0490 0.67 -2.3 493,598 - Dsui_0490 0.83 +0.1 493,627 + Dsui_0490 0.85 +0.4 493,635 - Dsui_0490 0.85 +1.7 493,650 - Dsui_0490 0.86 -1.2 493,829 + -1.1 493,846 - -1.0 493,942 + -1.5 494,018 - Dsui_0491 0.13 -1.0 494,085 + Dsui_0491 0.18 -2.8 494,169 - Dsui_0491 0.25 -2.0 494,208 - Dsui_0491 0.28 -1.3 494,426 - Dsui_0491 0.46 -1.7 494,495 + +0.4 494,500 + Dsui_0491 0.52 -1.6 494,573 + Dsui_0491 0.58 +0.4 494,593 - Dsui_0491 0.59 -1.0 494,609 + Dsui_0491 0.61 -1.2 494,609 + Dsui_0491 0.61 -2.2 494,610 - Dsui_0491 0.61 -1.2 494,715 + Dsui_0491 0.69 -0.6 494,755 + Dsui_0491 0.72 -1.2 494,800 - Dsui_0491 0.76 -0.2 494,810 - Dsui_0491 0.77 -1.2 494,810 - Dsui_0491 0.77 -1.1 494,810 - Dsui_0491 0.77 -1.7 494,855 - Dsui_0491 0.80 -0.4 494,923 + Dsui_0491 0.86 +0.4 494,980 + -1.8 495,155 + +0.4 495,202 - -0.2 495,238 + -2.4 495,487 - Dsui_0492 0.42 -0.4 495,598 + Dsui_0492 0.60 -0.6 495,765 - Dsui_0492 0.89 -0.1 495,772 - Dsui_0492 0.90 +0.4 495,772 - Dsui_0492 0.90 -0.0 495,775 + +0.4 495,808 - +0.6 495,828 + -1.2 495,833 + -0.6 495,833 + -0.6 495,833 + -1.6 495,841 - -0.0 495,841 - -0.3 496,081 - Dsui_0493 0.27 +0.3
Or see this region's nucleotide sequence