Experiment: ALP with Fusidic 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0459 and Dsui_0460 are separated by 25 nucleotides Dsui_0460 and Dsui_0461 overlap by 4 nucleotides
Dsui_0459: Dsui_0459 - DNA polymerase I, at 462,976 to 465,708
_0459
Dsui_0460: Dsui_0460 - ADP-heptose:LPS heptosyltransferase, at 465,734 to 466,699
_0460
Dsui_0461: Dsui_0461 - glycosyltransferase, at 466,696 to 467,832
_0461
Position (kb) 465
466
467 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 465.115 kb on + strand, within Dsui_0459 at 465.178 kb on - strand at 465.213 kb on + strand, within Dsui_0459 at 465.545 kb on + strand at 465.812 kb on + strand at 465.820 kb on - strand at 465.888 kb on - strand, within Dsui_0460 at 465.940 kb on - strand, within Dsui_0460 at 466.153 kb on + strand at 466.448 kb on + strand, within Dsui_0460 at 466.642 kb on + strand at 466.650 kb on + strand at 466.650 kb on + strand at 466.650 kb on + strand at 466.650 kb on + strand at 466.652 kb on + strand at 466.658 kb on - strand at 466.658 kb on - strand at 466.758 kb on - strand at 466.795 kb on + strand at 466.810 kb on + strand, within Dsui_0461 at 466.880 kb on + strand, within Dsui_0461 at 466.880 kb on + strand, within Dsui_0461 at 466.880 kb on + strand, within Dsui_0461 at 466.903 kb on + strand, within Dsui_0461 at 466.947 kb on + strand, within Dsui_0461 at 467.042 kb on - strand, within Dsui_0461 at 467.107 kb on - strand, within Dsui_0461 at 467.130 kb on - strand, within Dsui_0461 at 467.258 kb on - strand, within Dsui_0461 at 467.447 kb on + strand, within Dsui_0461 at 467.449 kb on + strand, within Dsui_0461 at 467.508 kb on + strand, within Dsui_0461 at 467.532 kb on - strand, within Dsui_0461 at 467.605 kb on + strand, within Dsui_0461 at 467.699 kb on - strand, within Dsui_0461
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Fusidic 0.02 mg/ml remove 465,115 + Dsui_0459 0.78 +0.1 465,178 - +0.4 465,213 + Dsui_0459 0.82 -0.6 465,545 + -1.3 465,812 + +3.3 465,820 - +3.5 465,888 - Dsui_0460 0.16 +3.9 465,940 - Dsui_0460 0.21 +3.7 466,153 + -0.6 466,448 + Dsui_0460 0.74 +0.4 466,642 + -1.9 466,650 + -0.6 466,650 + +0.4 466,650 + +0.4 466,650 + +0.4 466,652 + -2.6 466,658 - +3.5 466,658 - +3.6 466,758 - +1.8 466,795 + -0.6 466,810 + Dsui_0461 0.10 +0.4 466,880 + Dsui_0461 0.16 +0.4 466,880 + Dsui_0461 0.16 +0.4 466,880 + Dsui_0461 0.16 +0.4 466,903 + Dsui_0461 0.18 +0.4 466,947 + Dsui_0461 0.22 -1.6 467,042 - Dsui_0461 0.30 +0.8 467,107 - Dsui_0461 0.36 +1.6 467,130 - Dsui_0461 0.38 +1.3 467,258 - Dsui_0461 0.49 +3.2 467,447 + Dsui_0461 0.66 +1.2 467,449 + Dsui_0461 0.66 +1.5 467,508 + Dsui_0461 0.71 +1.4 467,532 - Dsui_0461 0.74 +1.6 467,605 + Dsui_0461 0.80 +1.1 467,699 - Dsui_0461 0.88 +1.6
Or see this region's nucleotide sequence