Experiment: ALP with Fusidic 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0398 and Dsui_0399 are separated by 2 nucleotides Dsui_0399 and Dsui_0400 are separated by 1 nucleotides
Dsui_0398: Dsui_0398 - UDP-glucose-4-epimerase, at 395,875 to 396,888
_0398
Dsui_0399: Dsui_0399 - symmetrical bis(5'-nucleosyl)-tetraphosphatase, at 396,891 to 397,721
_0399
Dsui_0400: Dsui_0400 - putative nucleoside-diphosphate sugar epimerase, at 397,723 to 399,585
_0400
Position (kb) 396
397
398 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2
3
4 at 396.068 kb on + strand, within Dsui_0398 at 396.094 kb on + strand, within Dsui_0398 at 396.147 kb on - strand, within Dsui_0398 at 396.213 kb on + strand at 396.232 kb on - strand, within Dsui_0398 at 396.276 kb on + strand, within Dsui_0398 at 396.489 kb on - strand, within Dsui_0398 at 396.510 kb on - strand, within Dsui_0398 at 396.535 kb on + strand, within Dsui_0398 at 396.560 kb on + strand, within Dsui_0398 at 396.578 kb on - strand, within Dsui_0398 at 396.612 kb on - strand, within Dsui_0398 at 396.633 kb on - strand, within Dsui_0398 at 396.740 kb on + strand, within Dsui_0398 at 396.740 kb on + strand, within Dsui_0398 at 396.748 kb on - strand, within Dsui_0398 at 396.804 kb on - strand at 396.864 kb on + strand at 396.872 kb on - strand at 397.007 kb on - strand, within Dsui_0399 at 397.141 kb on + strand, within Dsui_0399 at 397.266 kb on - strand, within Dsui_0399 at 397.406 kb on - strand at 397.504 kb on + strand, within Dsui_0399 at 397.538 kb on - strand, within Dsui_0399 at 397.600 kb on + strand at 397.659 kb on + strand at 397.756 kb on - strand at 397.819 kb on + strand at 397.841 kb on + strand at 397.841 kb on + strand at 397.841 kb on + strand at 397.841 kb on + strand at 397.995 kb on - strand, within Dsui_0400 at 398.062 kb on + strand, within Dsui_0400 at 398.253 kb on + strand, within Dsui_0400 at 398.257 kb on - strand, within Dsui_0400 at 398.335 kb on + strand, within Dsui_0400 at 398.358 kb on - strand, within Dsui_0400 at 398.415 kb on + strand, within Dsui_0400 at 398.452 kb on + strand, within Dsui_0400 at 398.455 kb on + strand, within Dsui_0400 at 398.522 kb on + strand, within Dsui_0400 at 398.548 kb on - strand, within Dsui_0400 at 398.662 kb on - strand, within Dsui_0400
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Fusidic 0.02 mg/ml remove 396,068 + Dsui_0398 0.19 -2.7 396,094 + Dsui_0398 0.22 +0.5 396,147 - Dsui_0398 0.27 -4.9 396,213 + +0.5 396,232 - Dsui_0398 0.35 -2.2 396,276 + Dsui_0398 0.40 -0.5 396,489 - Dsui_0398 0.61 -2.5 396,510 - Dsui_0398 0.63 -3.7 396,535 + Dsui_0398 0.65 -0.5 396,560 + Dsui_0398 0.68 -0.5 396,578 - Dsui_0398 0.69 -2.1 396,612 - Dsui_0398 0.73 -2.4 396,633 - Dsui_0398 0.75 -1.4 396,740 + Dsui_0398 0.85 -0.5 396,740 + Dsui_0398 0.85 +0.5 396,748 - Dsui_0398 0.86 -3.6 396,804 - -4.6 396,864 + +0.5 396,872 - -3.2 397,007 - Dsui_0399 0.14 +4.1 397,141 + Dsui_0399 0.30 -0.5 397,266 - Dsui_0399 0.45 +4.3 397,406 - +2.8 397,504 + Dsui_0399 0.74 -2.8 397,538 - Dsui_0399 0.78 +3.9 397,600 + +0.5 397,659 + -1.8 397,756 - -4.4 397,819 + -0.5 397,841 + -0.5 397,841 + -3.0 397,841 + -0.5 397,841 + -0.5 397,995 - Dsui_0400 0.15 -3.5 398,062 + Dsui_0400 0.18 -0.5 398,253 + Dsui_0400 0.28 -1.8 398,257 - Dsui_0400 0.29 -2.8 398,335 + Dsui_0400 0.33 +0.5 398,358 - Dsui_0400 0.34 -3.8 398,415 + Dsui_0400 0.37 +0.5 398,452 + Dsui_0400 0.39 -1.5 398,455 + Dsui_0400 0.39 +0.5 398,522 + Dsui_0400 0.43 -1.5 398,548 - Dsui_0400 0.44 -4.3 398,662 - Dsui_0400 0.50 -1.9
Or see this region's nucleotide sequence