Experiment: ALP with Fusidic 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0314 and Dsui_0315 are separated by 41 nucleotides Dsui_0315 and Dsui_0316 are separated by 92 nucleotides Dsui_0316 and Dsui_0317 are separated by 170 nucleotides
Dsui_0314: Dsui_0314 - cell division protein, at 316,216 to 317,061
_0314
Dsui_0315: Dsui_0315 - Protein of unknown function (DUF2802), at 317,103 to 317,657
_0315
Dsui_0316: Dsui_0316 - hypothetical protein, at 317,750 to 318,253
_0316
Dsui_0317: Dsui_0317 - acetyl-CoA acetyltransferase, at 318,424 to 319,623
_0317
Position (kb) 317
318
319 Strain fitness (log2 ratio) -2
-1
0
1 at 316.951 kb on - strand, within Dsui_0314 at 316.962 kb on - strand, within Dsui_0314 at 316.973 kb on - strand, within Dsui_0314 at 317.008 kb on - strand at 317.143 kb on + strand at 317.143 kb on + strand at 317.248 kb on + strand, within Dsui_0315 at 317.248 kb on + strand, within Dsui_0315 at 317.256 kb on - strand, within Dsui_0315 at 317.256 kb on - strand, within Dsui_0315 at 317.288 kb on + strand, within Dsui_0315 at 317.339 kb on + strand, within Dsui_0315 at 317.427 kb on + strand at 317.427 kb on + strand, within Dsui_0315 at 317.435 kb on - strand, within Dsui_0315 at 317.435 kb on - strand, within Dsui_0315 at 317.435 kb on - strand, within Dsui_0315 at 317.435 kb on - strand, within Dsui_0315 at 317.616 kb on - strand at 317.633 kb on + strand at 317.745 kb on - strand at 317.747 kb on + strand at 317.806 kb on + strand, within Dsui_0316 at 317.821 kb on - strand at 317.821 kb on - strand, within Dsui_0316 at 317.822 kb on - strand, within Dsui_0316 at 317.850 kb on + strand, within Dsui_0316 at 317.961 kb on - strand, within Dsui_0316 at 318.265 kb on + strand at 318.339 kb on + strand at 318.339 kb on + strand at 318.347 kb on - strand at 318.390 kb on + strand at 318.439 kb on - strand at 318.439 kb on - strand at 318.449 kb on - strand at 318.623 kb on - strand, within Dsui_0317 at 318.708 kb on - strand, within Dsui_0317 at 318.798 kb on + strand, within Dsui_0317 at 318.917 kb on + strand, within Dsui_0317 at 318.995 kb on + strand, within Dsui_0317 at 319.032 kb on + strand, within Dsui_0317 at 319.033 kb on - strand, within Dsui_0317 at 319.034 kb on - strand, within Dsui_0317 at 319.083 kb on + strand at 319.135 kb on - strand, within Dsui_0317 at 319.137 kb on + strand, within Dsui_0317 at 319.140 kb on - strand, within Dsui_0317 at 319.209 kb on + strand, within Dsui_0317 at 319.237 kb on - strand, within Dsui_0317
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Fusidic 0.02 mg/ml remove 316,951 - Dsui_0314 0.87 -0.1 316,962 - Dsui_0314 0.88 -0.2 316,973 - Dsui_0314 0.89 -0.4 317,008 - +0.1 317,143 + -1.1 317,143 + -1.8 317,248 + Dsui_0315 0.26 -0.5 317,248 + Dsui_0315 0.26 -0.5 317,256 - Dsui_0315 0.28 -0.4 317,256 - Dsui_0315 0.28 +0.1 317,288 + Dsui_0315 0.33 +0.5 317,339 + Dsui_0315 0.43 +0.5 317,427 + +0.5 317,427 + Dsui_0315 0.58 -1.1 317,435 - Dsui_0315 0.60 +0.0 317,435 - Dsui_0315 0.60 -0.2 317,435 - Dsui_0315 0.60 +0.2 317,435 - Dsui_0315 0.60 +0.4 317,616 - -0.3 317,633 + +0.5 317,745 - -2.5 317,747 + +0.5 317,806 + Dsui_0316 0.11 -1.5 317,821 - -1.1 317,821 - Dsui_0316 0.14 -2.1 317,822 - Dsui_0316 0.14 -0.1 317,850 + Dsui_0316 0.20 -0.5 317,961 - Dsui_0316 0.42 -1.5 318,265 + +0.5 318,339 + -2.3 318,339 + +0.5 318,347 - -0.5 318,390 + +0.5 318,439 - -0.6 318,439 - +0.4 318,449 - +0.4 318,623 - Dsui_0317 0.17 +1.5 318,708 - Dsui_0317 0.24 +0.8 318,798 + Dsui_0317 0.31 +0.5 318,917 + Dsui_0317 0.41 -0.5 318,995 + Dsui_0317 0.48 +0.5 319,032 + Dsui_0317 0.51 -1.8 319,033 - Dsui_0317 0.51 -2.5 319,034 - Dsui_0317 0.51 +0.5 319,083 + +0.5 319,135 - Dsui_0317 0.59 -0.4 319,137 + Dsui_0317 0.59 -1.5 319,140 - Dsui_0317 0.60 +0.0 319,209 + Dsui_0317 0.65 -0.5 319,237 - Dsui_0317 0.68 -1.8
Or see this region's nucleotide sequence