Experiment: ALP with Fusidic 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0269 and Dsui_0270 are separated by 8 nucleotides Dsui_0270 and Dsui_0271 are separated by 77 nucleotides Dsui_0271 and Dsui_0272 overlap by 4 nucleotides
Dsui_0269: Dsui_0269 - ABC-type multidrug transport system, permease component, at 270,523 to 271,659
_0269
Dsui_0270: Dsui_0270 - transcriptional regulator, at 271,668 to 272,336
_0270
Dsui_0271: Dsui_0271 - response regulator with CheY-like receiver domain and winged-helix DNA-binding domain, at 272,414 to 273,121
_0271
Dsui_0272: Dsui_0272 - osmosensitive K+ channel histidine kinase, at 273,118 to 275,814
_0272
Position (kb) 271
272
273 Strain fitness (log2 ratio) -2
-1
0
1
2 at 270.705 kb on + strand, within Dsui_0269 at 270.705 kb on - strand, within Dsui_0269 at 270.750 kb on + strand, within Dsui_0269 at 270.818 kb on + strand, within Dsui_0269 at 270.918 kb on - strand, within Dsui_0269 at 270.918 kb on - strand, within Dsui_0269 at 271.029 kb on + strand, within Dsui_0269 at 271.067 kb on + strand, within Dsui_0269 at 271.171 kb on + strand, within Dsui_0269 at 271.179 kb on - strand, within Dsui_0269 at 271.189 kb on - strand, within Dsui_0269 at 271.203 kb on + strand, within Dsui_0269 at 271.211 kb on - strand, within Dsui_0269 at 271.329 kb on - strand, within Dsui_0269 at 271.340 kb on - strand, within Dsui_0269 at 271.383 kb on + strand, within Dsui_0269 at 271.412 kb on + strand, within Dsui_0269 at 271.529 kb on - strand, within Dsui_0269 at 271.653 kb on + strand at 271.661 kb on - strand at 271.844 kb on - strand, within Dsui_0270 at 272.039 kb on + strand, within Dsui_0270 at 272.039 kb on + strand, within Dsui_0270 at 272.047 kb on - strand, within Dsui_0270 at 272.167 kb on + strand, within Dsui_0270 at 272.226 kb on + strand, within Dsui_0270 at 272.478 kb on + strand at 272.502 kb on + strand at 272.751 kb on + strand at 272.830 kb on + strand, within Dsui_0271 at 272.988 kb on - strand, within Dsui_0271 at 273.012 kb on + strand, within Dsui_0271 at 273.012 kb on + strand, within Dsui_0271 at 273.020 kb on - strand, within Dsui_0271 at 273.034 kb on - strand, within Dsui_0271 at 273.034 kb on - strand, within Dsui_0271
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Fusidic 0.02 mg/ml remove 270,705 + Dsui_0269 0.16 -1.2 270,705 - Dsui_0269 0.16 -1.0 270,750 + Dsui_0269 0.20 +0.6 270,818 + Dsui_0269 0.26 -0.1 270,918 - Dsui_0269 0.35 -1.4 270,918 - Dsui_0269 0.35 +0.6 271,029 + Dsui_0269 0.45 +0.6 271,067 + Dsui_0269 0.48 -2.0 271,171 + Dsui_0269 0.57 -1.4 271,179 - Dsui_0269 0.58 -1.0 271,189 - Dsui_0269 0.59 -2.4 271,203 + Dsui_0269 0.60 -0.2 271,211 - Dsui_0269 0.61 -0.4 271,329 - Dsui_0269 0.71 +0.6 271,340 - Dsui_0269 0.72 +0.6 271,383 + Dsui_0269 0.76 -0.3 271,412 + Dsui_0269 0.78 -1.2 271,529 - Dsui_0269 0.88 -0.4 271,653 + -0.6 271,661 - -0.5 271,844 - Dsui_0270 0.26 +0.5 272,039 + Dsui_0270 0.55 +0.4 272,039 + Dsui_0270 0.55 +1.5 272,047 - Dsui_0270 0.57 +0.5 272,167 + Dsui_0270 0.75 -1.5 272,226 + Dsui_0270 0.83 +1.0 272,478 + -0.5 272,502 + +0.5 272,751 + -0.5 272,830 + Dsui_0271 0.59 -1.0 272,988 - Dsui_0271 0.81 +0.4 273,012 + Dsui_0271 0.84 -2.0 273,012 + Dsui_0271 0.84 -0.5 273,020 - Dsui_0271 0.86 -1.5 273,034 - Dsui_0271 0.88 +2.3 273,034 - Dsui_0271 0.88 -1.0
Or see this region's nucleotide sequence