Experiment: ALP with Fusidic 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0268 and Dsui_0269 are separated by 9 nucleotides Dsui_0269 and Dsui_0270 are separated by 8 nucleotides Dsui_0270 and Dsui_0271 are separated by 77 nucleotides
Dsui_0268: Dsui_0268 - ABC-type multidrug transport system, ATPase component, at 267,757 to 270,513
_0268
Dsui_0269: Dsui_0269 - ABC-type multidrug transport system, permease component, at 270,523 to 271,659
_0269
Dsui_0270: Dsui_0270 - transcriptional regulator, at 271,668 to 272,336
_0270
Dsui_0271: Dsui_0271 - response regulator with CheY-like receiver domain and winged-helix DNA-binding domain, at 272,414 to 273,121
_0271
Position (kb) 270
271
272 Strain fitness (log2 ratio) -2
-1
0
1 at 269.533 kb on - strand, within Dsui_0268 at 269.617 kb on - strand, within Dsui_0268 at 269.797 kb on + strand, within Dsui_0268 at 269.860 kb on + strand, within Dsui_0268 at 269.863 kb on - strand at 269.865 kb on + strand, within Dsui_0268 at 269.873 kb on - strand at 269.874 kb on - strand, within Dsui_0268 at 270.014 kb on + strand, within Dsui_0268 at 270.032 kb on - strand, within Dsui_0268 at 270.042 kb on - strand at 270.088 kb on - strand, within Dsui_0268 at 270.135 kb on - strand, within Dsui_0268 at 270.186 kb on + strand, within Dsui_0268 at 270.194 kb on - strand at 270.209 kb on + strand, within Dsui_0268 at 270.209 kb on + strand, within Dsui_0268 at 270.217 kb on - strand, within Dsui_0268 at 270.217 kb on - strand, within Dsui_0268 at 270.240 kb on + strand at 270.360 kb on - strand at 270.360 kb on - strand at 270.409 kb on + strand at 270.414 kb on + strand at 270.455 kb on + strand at 270.463 kb on - strand at 270.705 kb on + strand, within Dsui_0269 at 270.705 kb on - strand, within Dsui_0269 at 270.750 kb on + strand, within Dsui_0269 at 270.818 kb on + strand, within Dsui_0269 at 270.918 kb on - strand, within Dsui_0269 at 270.918 kb on - strand, within Dsui_0269 at 271.029 kb on + strand, within Dsui_0269 at 271.067 kb on + strand, within Dsui_0269 at 271.171 kb on + strand, within Dsui_0269 at 271.179 kb on - strand, within Dsui_0269 at 271.189 kb on - strand, within Dsui_0269 at 271.203 kb on + strand, within Dsui_0269 at 271.211 kb on - strand, within Dsui_0269 at 271.329 kb on - strand, within Dsui_0269 at 271.340 kb on - strand, within Dsui_0269 at 271.383 kb on + strand, within Dsui_0269 at 271.412 kb on + strand, within Dsui_0269 at 271.529 kb on - strand, within Dsui_0269 at 271.653 kb on + strand at 271.661 kb on - strand at 271.844 kb on - strand, within Dsui_0270 at 272.039 kb on + strand, within Dsui_0270 at 272.039 kb on + strand, within Dsui_0270 at 272.047 kb on - strand, within Dsui_0270 at 272.167 kb on + strand, within Dsui_0270 at 272.226 kb on + strand, within Dsui_0270 at 272.478 kb on + strand at 272.502 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Fusidic 0.02 mg/ml remove 269,533 - Dsui_0268 0.64 -0.4 269,617 - Dsui_0268 0.67 -1.0 269,797 + Dsui_0268 0.74 +0.0 269,860 + Dsui_0268 0.76 +0.2 269,863 - +0.6 269,865 + Dsui_0268 0.76 -0.6 269,873 - -0.4 269,874 - Dsui_0268 0.77 +0.6 270,014 + Dsui_0268 0.82 +0.7 270,032 - Dsui_0268 0.83 +0.6 270,042 - -1.0 270,088 - Dsui_0268 0.85 -0.4 270,135 - Dsui_0268 0.86 -0.4 270,186 + Dsui_0268 0.88 -0.4 270,194 - +0.6 270,209 + Dsui_0268 0.89 -0.3 270,209 + Dsui_0268 0.89 -0.5 270,217 - Dsui_0268 0.89 -2.6 270,217 - Dsui_0268 0.89 -1.0 270,240 + -0.9 270,360 - -0.4 270,360 - -0.4 270,409 + -0.4 270,414 + -0.4 270,455 + -2.0 270,463 - +0.6 270,705 + Dsui_0269 0.16 -1.2 270,705 - Dsui_0269 0.16 -1.0 270,750 + Dsui_0269 0.20 +0.6 270,818 + Dsui_0269 0.26 -0.1 270,918 - Dsui_0269 0.35 -1.4 270,918 - Dsui_0269 0.35 +0.6 271,029 + Dsui_0269 0.45 +0.6 271,067 + Dsui_0269 0.48 -2.0 271,171 + Dsui_0269 0.57 -1.4 271,179 - Dsui_0269 0.58 -1.0 271,189 - Dsui_0269 0.59 -2.4 271,203 + Dsui_0269 0.60 -0.2 271,211 - Dsui_0269 0.61 -0.4 271,329 - Dsui_0269 0.71 +0.6 271,340 - Dsui_0269 0.72 +0.6 271,383 + Dsui_0269 0.76 -0.3 271,412 + Dsui_0269 0.78 -1.2 271,529 - Dsui_0269 0.88 -0.4 271,653 + -0.6 271,661 - -0.5 271,844 - Dsui_0270 0.26 +0.5 272,039 + Dsui_0270 0.55 +0.4 272,039 + Dsui_0270 0.55 +1.5 272,047 - Dsui_0270 0.57 +0.5 272,167 + Dsui_0270 0.75 -1.5 272,226 + Dsui_0270 0.83 +1.0 272,478 + -0.5 272,502 + +0.5
Or see this region's nucleotide sequence