Experiment: ALP with Fusidic 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0255 and Dsui_0256 are separated by 192 nucleotides Dsui_0256 and Dsui_0257 are separated by 46 nucleotides Dsui_0257 and Dsui_0258 are separated by 194 nucleotides
Dsui_0255: Dsui_0255 - hypothetical protein, at 253,221 to 254,048
_0255
Dsui_0256: Dsui_0256 - glutathione peroxidase, at 254,241 to 254,810
_0256
Dsui_0257: Dsui_0257 - hypothetical protein, at 254,857 to 255,660
_0257
Dsui_0258: Dsui_0258 - sulfate ABC transporter, ATP-binding protein, at 255,855 to 256,937
_0258
Position (kb) 254
255
256 Strain fitness (log2 ratio) -2
-1
0
1
2 at 253.959 kb on - strand, within Dsui_0255 at 254.056 kb on - strand at 254.084 kb on + strand at 254.084 kb on + strand at 254.084 kb on + strand at 254.084 kb on + strand at 254.084 kb on + strand at 254.084 kb on + strand at 254.084 kb on + strand at 254.084 kb on + strand at 254.084 kb on + strand at 254.084 kb on + strand at 254.084 kb on + strand at 254.084 kb on + strand at 254.084 kb on + strand at 254.084 kb on + strand at 254.090 kb on - strand at 254.092 kb on - strand at 254.092 kb on - strand at 254.092 kb on - strand at 254.092 kb on - strand at 254.092 kb on - strand at 254.092 kb on - strand at 254.092 kb on - strand at 254.092 kb on - strand at 254.092 kb on - strand at 254.092 kb on - strand at 254.092 kb on - strand at 254.138 kb on - strand at 254.155 kb on - strand at 254.218 kb on + strand at 254.222 kb on + strand at 254.417 kb on + strand, within Dsui_0256 at 254.425 kb on - strand, within Dsui_0256 at 254.490 kb on + strand, within Dsui_0256 at 254.498 kb on - strand, within Dsui_0256 at 254.607 kb on - strand, within Dsui_0256 at 254.609 kb on + strand, within Dsui_0256 at 254.644 kb on + strand, within Dsui_0256 at 254.655 kb on + strand, within Dsui_0256 at 254.666 kb on + strand, within Dsui_0256 at 254.669 kb on - strand, within Dsui_0256 at 254.822 kb on + strand at 254.893 kb on + strand at 255.020 kb on - strand, within Dsui_0257 at 255.047 kb on - strand, within Dsui_0257 at 255.286 kb on + strand, within Dsui_0257 at 255.287 kb on + strand, within Dsui_0257 at 255.399 kb on + strand, within Dsui_0257 at 255.401 kb on - strand, within Dsui_0257 at 255.435 kb on + strand, within Dsui_0257 at 255.496 kb on + strand, within Dsui_0257 at 255.548 kb on - strand, within Dsui_0257 at 255.632 kb on + strand at 255.632 kb on + strand at 255.734 kb on - strand at 256.030 kb on + strand, within Dsui_0258 at 256.093 kb on + strand, within Dsui_0258 at 256.131 kb on + strand, within Dsui_0258 at 256.178 kb on + strand, within Dsui_0258 at 256.178 kb on + strand, within Dsui_0258 at 256.435 kb on - strand, within Dsui_0258 at 256.494 kb on + strand at 256.565 kb on + strand, within Dsui_0258 at 256.570 kb on + strand, within Dsui_0258 at 256.588 kb on - strand, within Dsui_0258
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Fusidic 0.02 mg/ml remove 253,959 - Dsui_0255 0.89 +1.5 254,056 - +2.0 254,084 + +0.7 254,084 + +0.7 254,084 + -2.1 254,084 + +0.7 254,084 + +0.7 254,084 + -1.3 254,084 + +0.7 254,084 + -1.6 254,084 + +0.7 254,084 + +0.7 254,084 + +0.7 254,084 + +0.7 254,084 + -0.3 254,084 + -0.3 254,090 - +0.5 254,092 - +1.8 254,092 - +1.5 254,092 - +1.7 254,092 - +0.7 254,092 - +0.8 254,092 - +1.7 254,092 - +1.6 254,092 - +1.8 254,092 - +0.8 254,092 - +1.6 254,092 - +0.8 254,138 - +0.7 254,155 - -1.9 254,218 + +0.1 254,222 + -0.3 254,417 + Dsui_0256 0.31 -0.0 254,425 - Dsui_0256 0.32 +0.7 254,490 + Dsui_0256 0.44 -0.1 254,498 - Dsui_0256 0.45 +0.7 254,607 - Dsui_0256 0.64 -1.6 254,609 + Dsui_0256 0.65 +0.1 254,644 + Dsui_0256 0.71 -0.3 254,655 + Dsui_0256 0.73 +0.5 254,666 + Dsui_0256 0.75 -0.2 254,669 - Dsui_0256 0.75 -1.6 254,822 + +0.3 254,893 + +0.1 255,020 - Dsui_0257 0.20 -0.3 255,047 - Dsui_0257 0.24 +0.7 255,286 + Dsui_0257 0.53 -0.1 255,287 + Dsui_0257 0.53 +0.2 255,399 + Dsui_0257 0.67 +0.3 255,401 - Dsui_0257 0.68 -0.3 255,435 + Dsui_0257 0.72 +0.9 255,496 + Dsui_0257 0.79 +0.5 255,548 - Dsui_0257 0.86 +0.7 255,632 + +1.3 255,632 + +0.8 255,734 - +0.7 256,030 + Dsui_0258 0.16 -0.3 256,093 + Dsui_0258 0.22 -0.3 256,131 + Dsui_0258 0.25 -0.3 256,178 + Dsui_0258 0.30 +0.7 256,178 + Dsui_0258 0.30 -0.3 256,435 - Dsui_0258 0.54 +0.1 256,494 + +0.7 256,565 + Dsui_0258 0.66 -0.9 256,570 + Dsui_0258 0.66 +0.7 256,588 - Dsui_0258 0.68 +0.0
Or see this region's nucleotide sequence