Experiment: ALP with Fusidic 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0177 and Dsui_0178 are separated by 28 nucleotides Dsui_0178 and Dsui_0179 are separated by 15 nucleotides Dsui_0179 and Dsui_0180 are separated by 1 nucleotides Dsui_0180 and Dsui_0181 are separated by 180 nucleotides Dsui_0181 and Dsui_0182 are separated by 393 nucleotides
Dsui_0177: Dsui_0177 - hypothetical protein, at 180,760 to 181,641
_0177
Dsui_0178: Dsui_0178 - hypothetical protein, at 181,670 to 182,509
_0178
Dsui_0179: Dsui_0179 - hypothetical protein, at 182,525 to 182,614
_0179
Dsui_0180: Dsui_0180 - hypothetical protein, at 182,616 to 182,885
_0180
Dsui_0181: Dsui_0181 - hypothetical protein, at 183,066 to 183,296
_0181
Dsui_0182: Dsui_0182 - hypothetical protein, at 183,690 to 184,331
_0182
Position (kb) 182
183 Strain fitness (log2 ratio) -2
-1
0
1 at 181.643 kb on + strand at 181.651 kb on - strand at 181.653 kb on + strand at 181.704 kb on + strand at 181.716 kb on + strand at 181.774 kb on - strand, within Dsui_0178 at 181.829 kb on - strand at 181.861 kb on + strand, within Dsui_0178 at 181.869 kb on - strand, within Dsui_0178 at 182.114 kb on + strand, within Dsui_0178 at 182.191 kb on + strand, within Dsui_0178 at 182.191 kb on + strand, within Dsui_0178 at 182.280 kb on + strand, within Dsui_0178 at 182.546 kb on + strand, within Dsui_0179 at 182.546 kb on + strand, within Dsui_0179 at 182.681 kb on + strand, within Dsui_0180 at 182.681 kb on + strand, within Dsui_0180 at 182.708 kb on - strand, within Dsui_0180 at 182.756 kb on - strand, within Dsui_0180 at 182.764 kb on - strand, within Dsui_0180 at 183.045 kb on + strand at 183.089 kb on - strand, within Dsui_0181 at 183.210 kb on + strand, within Dsui_0181 at 183.315 kb on + strand at 183.336 kb on + strand at 183.344 kb on - strand at 183.428 kb on - strand at 183.501 kb on + strand at 183.540 kb on + strand at 183.545 kb on + strand at 183.590 kb on - strand at 183.619 kb on - strand at 183.622 kb on + strand at 183.634 kb on + strand at 183.743 kb on - strand at 183.743 kb on - strand at 183.762 kb on - strand, within Dsui_0182 at 183.768 kb on - strand, within Dsui_0182 at 183.768 kb on - strand, within Dsui_0182 at 183.773 kb on - strand, within Dsui_0182 at 183.786 kb on + strand, within Dsui_0182 at 183.848 kb on - strand, within Dsui_0182 at 183.861 kb on + strand, within Dsui_0182 at 183.863 kb on + strand, within Dsui_0182
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Fusidic 0.02 mg/ml remove 181,643 + -0.2 181,651 - +0.8 181,653 + +0.8 181,704 + +0.8 181,716 + +0.8 181,774 - Dsui_0178 0.12 -0.2 181,829 - +0.8 181,861 + Dsui_0178 0.23 -1.8 181,869 - Dsui_0178 0.24 +0.8 182,114 + Dsui_0178 0.53 -1.5 182,191 + Dsui_0178 0.62 -0.2 182,191 + Dsui_0178 0.62 +0.8 182,280 + Dsui_0178 0.73 -1.8 182,546 + Dsui_0179 0.23 +0.8 182,546 + Dsui_0179 0.23 -0.2 182,681 + Dsui_0180 0.24 +0.8 182,681 + Dsui_0180 0.24 -1.2 182,708 - Dsui_0180 0.34 -0.2 182,756 - Dsui_0180 0.52 -0.8 182,764 - Dsui_0180 0.55 +0.8 183,045 + +0.8 183,089 - Dsui_0181 0.10 +0.2 183,210 + Dsui_0181 0.62 +0.8 183,315 + +0.8 183,336 + +0.8 183,344 - +0.0 183,428 - +0.1 183,501 + -2.2 183,540 + -1.2 183,545 + +0.8 183,590 - +0.3 183,619 - -0.2 183,622 + +0.8 183,634 + +0.8 183,743 - +0.0 183,743 - +0.5 183,762 - Dsui_0182 0.11 -1.4 183,768 - Dsui_0182 0.12 -0.3 183,768 - Dsui_0182 0.12 +0.2 183,773 - Dsui_0182 0.13 -0.1 183,786 + Dsui_0182 0.15 +0.8 183,848 - Dsui_0182 0.25 +0.2 183,861 + Dsui_0182 0.27 -1.5 183,863 + Dsui_0182 0.27 -0.2
Or see this region's nucleotide sequence