Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2873 and DvMF_2874 are separated by 528 nucleotides DvMF_2874 and DvMF_2875 are separated by 335 nucleotides
DvMF_2873: DvMF_2873 - preprotein translocase subunit SecA (RefSeq), at 3,626,815 to 3,629,349
_2873
DvMF_2874: DvMF_2874 - 4Fe-4S ferredoxin iron-sulfur binding domain protein (RefSeq), at 3,629,878 to 3,631,284
_2874
DvMF_2875: DvMF_2875 - FAD linked oxidase domain protein (RefSeq), at 3,631,620 to 3,633,044
_2875
Position (kb)
3629
3630
3631
3632 Strain fitness (log2 ratio)
-1
0
1 at 3629.613 kb on - strand at 3629.750 kb on - strand at 3629.909 kb on - strand at 3630.101 kb on - strand, within DvMF_2874 at 3630.288 kb on + strand, within DvMF_2874 at 3630.294 kb on - strand, within DvMF_2874 at 3630.367 kb on + strand, within DvMF_2874 at 3630.476 kb on - strand, within DvMF_2874 at 3630.582 kb on - strand, within DvMF_2874 at 3630.926 kb on - strand, within DvMF_2874 at 3631.110 kb on + strand, within DvMF_2874 at 3631.192 kb on - strand at 3631.463 kb on + strand at 3631.832 kb on + strand, within DvMF_2875 at 3631.962 kb on - strand, within DvMF_2875 at 3631.977 kb on - strand, within DvMF_2875 at 3632.023 kb on - strand, within DvMF_2875 at 3632.253 kb on + strand, within DvMF_2875 at 3632.261 kb on - strand, within DvMF_2875 at 3632.261 kb on - strand, within DvMF_2875
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 3,629,613 - +0.0 3,629,750 - +0.0 3,629,909 - +0.2 3,630,101 - DvMF_2874 0.16 -1.0 3,630,288 + DvMF_2874 0.29 +0.2 3,630,294 - DvMF_2874 0.30 +0.4 3,630,367 + DvMF_2874 0.35 +0.2 3,630,476 - DvMF_2874 0.43 +0.2 3,630,582 - DvMF_2874 0.50 +0.6 3,630,926 - DvMF_2874 0.74 +0.1 3,631,110 + DvMF_2874 0.88 +0.6 3,631,192 - +0.2 3,631,463 + +0.4 3,631,832 + DvMF_2875 0.15 +0.8 3,631,962 - DvMF_2875 0.24 +0.1 3,631,977 - DvMF_2875 0.25 +0.7 3,632,023 - DvMF_2875 0.28 +0.1 3,632,253 + DvMF_2875 0.44 +0.2 3,632,261 - DvMF_2875 0.45 +0.7 3,632,261 - DvMF_2875 0.45 +0.6
Or see this region's nucleotide sequence