Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1924 and DvMF_1925 overlap by 16 nucleotides DvMF_1925 and DvMF_1926 are separated by 434 nucleotides DvMF_1926 and DvMF_1927 are separated by 73 nucleotides
DvMF_1924: DvMF_1924 - ABC transporter related (RefSeq), at 2,372,553 to 2,373,755
_1924
DvMF_1925: DvMF_1925 - aminoglycoside phosphotransferase (RefSeq), at 2,373,740 to 2,375,062
_1925
DvMF_1926: DvMF_1926 - transcriptional regulator, TraR/DksA family (RefSeq), at 2,375,497 to 2,375,838
_1926
DvMF_1927: DvMF_1927 - glycosyl transferase family 2 (RefSeq), at 2,375,912 to 2,377,843
_1927
Position (kb)
2373
2374
2375
2376 Strain fitness (log2 ratio)
-1
0
1 at 2373.120 kb on - strand, within DvMF_1924 at 2373.306 kb on + strand, within DvMF_1924 at 2373.411 kb on + strand, within DvMF_1924 at 2373.424 kb on - strand, within DvMF_1924 at 2373.475 kb on - strand, within DvMF_1924 at 2373.489 kb on + strand, within DvMF_1924 at 2373.544 kb on + strand, within DvMF_1924 at 2373.552 kb on - strand, within DvMF_1924 at 2373.792 kb on - strand at 2373.931 kb on + strand, within DvMF_1925 at 2373.946 kb on + strand, within DvMF_1925 at 2373.949 kb on - strand, within DvMF_1925 at 2374.015 kb on + strand, within DvMF_1925 at 2374.136 kb on - strand, within DvMF_1925 at 2374.384 kb on + strand, within DvMF_1925 at 2374.722 kb on - strand, within DvMF_1925 at 2374.973 kb on - strand at 2375.478 kb on + strand at 2375.491 kb on - strand at 2375.570 kb on - strand, within DvMF_1926 at 2375.594 kb on - strand, within DvMF_1926 at 2375.823 kb on + strand at 2375.895 kb on + strand at 2375.925 kb on + strand at 2376.025 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 2,373,120 - DvMF_1924 0.47 +0.3 2,373,306 + DvMF_1924 0.63 +0.8 2,373,411 + DvMF_1924 0.71 +0.4 2,373,424 - DvMF_1924 0.72 +0.1 2,373,475 - DvMF_1924 0.77 -0.2 2,373,489 + DvMF_1924 0.78 +0.6 2,373,544 + DvMF_1924 0.82 +0.8 2,373,552 - DvMF_1924 0.83 +1.2 2,373,792 - +0.4 2,373,931 + DvMF_1925 0.14 -0.0 2,373,946 + DvMF_1925 0.16 -0.6 2,373,949 - DvMF_1925 0.16 -0.7 2,374,015 + DvMF_1925 0.21 +0.5 2,374,136 - DvMF_1925 0.30 +0.5 2,374,384 + DvMF_1925 0.49 +0.4 2,374,722 - DvMF_1925 0.74 +0.3 2,374,973 - +0.6 2,375,478 + +1.1 2,375,491 - -0.0 2,375,570 - DvMF_1926 0.21 -0.0 2,375,594 - DvMF_1926 0.28 +0.0 2,375,823 + +0.4 2,375,895 + +0.8 2,375,925 + +0.1 2,376,025 - +0.5
Or see this region's nucleotide sequence