Experiment: Formate/Acetate-Thiosulfate (60/30-15 mM) + 0.1% Yeast Extract
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt cls and DVU0425 are separated by 268 nucleotides DVU0425 and DVU0426 are separated by 207 nucleotides
DVU0424: cls - cardiolipin synthetase (TIGR), at 479,096 to 480,541
cls
DVU0425: DVU0425 - hypothetical protein (TIGR), at 480,810 to 481,616
DVU0425
DVU0426: DVU0426 - chromate transport family protein (TIGR), at 481,824 to 483,176
DVU0426
Position (kb) 480
481
482 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 479.843 kb on + strand, within cls at 479.870 kb on - strand, within cls at 479.892 kb on - strand, within cls at 479.924 kb on - strand, within cls at 479.929 kb on + strand, within cls at 479.976 kb on + strand, within cls at 479.977 kb on + strand, within cls at 480.003 kb on + strand, within cls at 480.003 kb on + strand, within cls at 480.003 kb on + strand, within cls at 480.003 kb on + strand, within cls at 480.011 kb on - strand, within cls at 480.011 kb on - strand, within cls at 480.011 kb on - strand, within cls at 480.011 kb on - strand, within cls at 480.121 kb on - strand, within cls at 480.170 kb on - strand, within cls at 480.224 kb on - strand, within cls at 480.242 kb on + strand, within cls at 480.357 kb on + strand, within cls at 480.397 kb on - strand at 480.499 kb on + strand at 480.499 kb on + strand at 480.507 kb on - strand at 480.514 kb on + strand at 480.522 kb on - strand at 480.530 kb on + strand at 480.537 kb on + strand at 480.587 kb on - strand at 480.587 kb on - strand at 480.605 kb on + strand at 480.656 kb on - strand at 480.671 kb on - strand at 480.698 kb on + strand at 480.706 kb on - strand at 480.770 kb on - strand at 480.770 kb on - strand at 480.788 kb on + strand at 480.950 kb on + strand, within DVU0425 at 481.036 kb on + strand, within DVU0425 at 481.084 kb on - strand, within DVU0425 at 481.118 kb on + strand, within DVU0425 at 481.126 kb on - strand, within DVU0425 at 481.161 kb on - strand, within DVU0425 at 481.173 kb on + strand, within DVU0425 at 481.187 kb on + strand, within DVU0425 at 481.207 kb on - strand, within DVU0425 at 481.226 kb on - strand, within DVU0425 at 481.240 kb on - strand, within DVU0425 at 481.344 kb on - strand, within DVU0425 at 481.365 kb on - strand, within DVU0425 at 481.417 kb on - strand, within DVU0425 at 481.421 kb on + strand, within DVU0425 at 481.469 kb on + strand, within DVU0425 at 481.496 kb on - strand, within DVU0425 at 481.525 kb on - strand, within DVU0425 at 481.611 kb on + strand at 481.611 kb on + strand at 481.619 kb on - strand at 481.619 kb on - strand at 481.688 kb on - strand at 481.723 kb on - strand at 481.723 kb on - strand at 481.736 kb on - strand at 481.768 kb on + strand at 481.822 kb on + strand at 481.822 kb on + strand at 481.822 kb on + strand at 481.822 kb on + strand at 481.822 kb on + strand at 481.830 kb on - strand at 481.830 kb on - strand at 481.834 kb on + strand at 481.886 kb on + strand at 481.946 kb on + strand at 481.986 kb on + strand, within DVU0426 at 482.073 kb on - strand, within DVU0426 at 482.084 kb on - strand, within DVU0426 at 482.095 kb on + strand, within DVU0426 at 482.097 kb on + strand, within DVU0426 at 482.105 kb on - strand, within DVU0426 at 482.284 kb on + strand, within DVU0426 at 482.465 kb on - strand, within DVU0426 at 482.473 kb on + strand, within DVU0426 at 482.478 kb on + strand, within DVU0426 at 482.486 kb on - strand, within DVU0426 at 482.509 kb on - strand, within DVU0426 at 482.560 kb on + strand, within DVU0426 at 482.569 kb on - strand, within DVU0426 at 482.592 kb on + strand, within DVU0426 at 482.600 kb on - strand, within DVU0426 at 482.601 kb on - strand, within DVU0426
Per-strain Table
Position Strand Gene LocusTag Fraction Formate/Acetate-Thiosulfate (60/30-15 mM) + 0.1% Yeast Extract remove 479,843 + cls DVU0424 0.52 -0.4 479,870 - cls DVU0424 0.54 -1.0 479,892 - cls DVU0424 0.55 -0.5 479,924 - cls DVU0424 0.57 +0.6 479,929 + cls DVU0424 0.58 +1.8 479,976 + cls DVU0424 0.61 +0.2 479,977 + cls DVU0424 0.61 +0.8 480,003 + cls DVU0424 0.63 +2.8 480,003 + cls DVU0424 0.63 +0.8 480,003 + cls DVU0424 0.63 -1.5 480,003 + cls DVU0424 0.63 +0.8 480,011 - cls DVU0424 0.63 -0.7 480,011 - cls DVU0424 0.63 -1.7 480,011 - cls DVU0424 0.63 -2.0 480,011 - cls DVU0424 0.63 +1.8 480,121 - cls DVU0424 0.71 -0.5 480,170 - cls DVU0424 0.74 +1.8 480,224 - cls DVU0424 0.78 -0.6 480,242 + cls DVU0424 0.79 -0.8 480,357 + cls DVU0424 0.87 -1.4 480,397 - +0.0 480,499 + +0.6 480,499 + -0.2 480,507 - -0.9 480,514 + +1.8 480,522 - -2.4 480,530 + -1.6 480,537 + -0.9 480,587 - +0.5 480,587 - +0.2 480,605 + -1.3 480,656 - -0.2 480,671 - +1.2 480,698 + -1.0 480,706 - -0.3 480,770 - -1.9 480,770 - -0.4 480,788 + +3.0 480,950 + DVU0425 0.17 -0.4 481,036 + DVU0425 0.28 +0.8 481,084 - DVU0425 0.34 +3.1 481,118 + DVU0425 0.38 +1.1 481,126 - DVU0425 0.39 +0.2 481,161 - DVU0425 0.43 -0.1 481,173 + DVU0425 0.45 -0.5 481,187 + DVU0425 0.47 +3.1 481,207 - DVU0425 0.49 -0.6 481,226 - DVU0425 0.52 -0.8 481,240 - DVU0425 0.53 -0.5 481,344 - DVU0425 0.66 -0.4 481,365 - DVU0425 0.69 -1.2 481,417 - DVU0425 0.75 -0.8 481,421 + DVU0425 0.76 -0.2 481,469 + DVU0425 0.82 -1.4 481,496 - DVU0425 0.85 -1.1 481,525 - DVU0425 0.89 +1.7 481,611 + -0.2 481,611 + -0.5 481,619 - +0.2 481,619 - -0.9 481,688 - -0.3 481,723 - -0.8 481,723 - +1.8 481,736 - +0.4 481,768 + -0.5 481,822 + +1.8 481,822 + +0.8 481,822 + -0.2 481,822 + -0.3 481,822 + -0.2 481,830 - -0.1 481,830 - +3.0 481,834 + +0.2 481,886 + +0.1 481,946 + +3.7 481,986 + DVU0426 0.12 +1.8 482,073 - DVU0426 0.18 +0.5 482,084 - DVU0426 0.19 -0.2 482,095 + DVU0426 0.20 +0.3 482,097 + DVU0426 0.20 +0.2 482,105 - DVU0426 0.21 +1.3 482,284 + DVU0426 0.34 +0.4 482,465 - DVU0426 0.47 -0.5 482,473 + DVU0426 0.48 -0.7 482,478 + DVU0426 0.48 -0.4 482,486 - DVU0426 0.49 -0.3 482,509 - DVU0426 0.51 -0.4 482,560 + DVU0426 0.54 +0.4 482,569 - DVU0426 0.55 +0.6 482,592 + DVU0426 0.57 -0.8 482,600 - DVU0426 0.57 +0.1 482,601 - DVU0426 0.57 +0.8
Or see this region's nucleotide sequence